Version 1.3.3 - Added on 3/21/2014

Author: Rebecca Alford (rfalf.nosp@m.ord1.nosp@m.2@gma.nosp@m.il.c.nosp@m.om)

Main Directory - Contians Components of static and dynamic representations of membrane proteins in Rosetta. Quick Descriptions of directory structure

• Top Level: Contains Membrane Protein Factory Code - Responsibile for full initialization of poses as membrane proteins. Loads as a top level resource with tag "startstruct" to work with JD2
• Config: Register protocols with mebrane protocol config manager to update and maintain core support
• Geometry: Code for representing geometry of the membrane and respective membrane embedding for protein chains
• Scoring: Refactored scoring methods with modified interface for pre-build search and score methods
• io: Resource manager classes respondible for loading membrane related data
• kinematics: Membrane protein specific fold tree code
• util: Membrane definitions and exceptions

Last Modified: 12/5/13