EmbedDefIO.cc File Reference

Read in data from files for membrane protein chain embeddings. More...

#include <core/membrane/io/EmbedDefIO.hh>
#include <core/conformation/membrane/definitions.hh>
#include <core/conformation/membrane/definitions_util.hh>
#include <core/conformation/membrane/Exceptions.hh>
#include <basic/resource_manager/ResourceManager.hh>
#include <basic/resource_manager/util.hh>
#include <core/types.hh>
#include <basic/Tracer.hh>
#include <utility/pointer/ReferenceCount.hh>
#include <utility/vector1.hh>
#include <utility/io/izstream.hh>
#include <utility/excn/Exceptions.hh>
#include <utility/exit.hh>
#include <utility/tag/Tag.hh>
#include <algorithm>
#include <string>
#include <cstdlib>
#include <cmath>

Namespaces
	core
	A class for defining atom parameters, known as atom_types.
	core::membrane
	core::membrane::io

Macros
#define	INCLUDED_core_membrane_io_EmbedDefIO_cc

Variables
static basic::Tracer	TR ("core.membrane.io.EmbedDefIO")

Detailed Description

Read in data from files for membrane protein chain embeddings.

Protein embedding is defined by a normal and center vector positioned with respect to the membrane as well as a specified depth

Note

Resource Manager Component

Author

Rebecca Alford (rfalf.nosp@m.ord1.nosp@m.2@gma.nosp@m.il.c.nosp@m.om)

Macro Definition Documentation

#define INCLUDED_core_membrane_io_EmbedDefIO_cc

Variable Documentation

basic::Tracer TR("core.membrane.io.EmbedDefIO")

static

Referenced by core::membrane::io::EmbedDefIO::read_embed_data().