SecondaryStructurePotential.cc File Reference

Scoring manager class header. More...

#include <core/scoring/SecondaryStructurePotential.hh>
#include <core/pose/Pose.hh>
#include <core/conformation/Conformation.hh>
#include <core/conformation/Residue.hh>
#include <core/chemical/AA.hh>
#include <core/chemical/VariantType.hh>
#include <basic/database/open.hh>
#include <core/graph/DisjointSets.hh>
#include <core/pose/datacache/CacheableDataType.hh>
#include <core/scoring/Energies.hh>
#include <basic/datacache/BasicDataCache.hh>
#include <core/conformation/symmetry/SymmetricConformation.hh>
#include <core/pose/symmetry/util.hh>
#include <core/conformation/symmetry/SymmetryInfo.hh>
#include <numeric/conversions.hh>
#include <numeric/trig.functions.hh>
#include <utility/pointer/ReferenceCount.hh>
#include <utility/io/izstream.hh>
#include <utility/vector1.hh>
#include <basic/prof.hh>
#include <ObjexxFCL/FArray1D.hh>
#include <ObjexxFCL/FArray2D.hh>
#include <ObjexxFCL/FArray3D.hh>
#include <cmath>
#include <iostream>
#include <core/kinematics/FoldTree.hh>
#include <core/scoring/EnergyGraph.hh>
#include <core/scoring/SS_Info.hh>
#include <core/scoring/SS_Killhairpins_Info.hh>
#include <ObjexxFCL/FArray1A.hh>
#include <ObjexxFCL/format.hh>

Classes
class	core::scoring::DimerPairing

Namespaces
	core
	A class for defining atom parameters, known as atom_types.
	core::scoring

Typedefs
typedef utility::pointer::owning_ptr < DimerPairing >	core::scoring::DimerPairingOP

Functions
SS_Info const &	core::scoring::retrieve_const_ss_info_from_pose (pose::Pose const &pose)
	helper function More...
SS_Info &	core::scoring::retrieve_nonconst_ss_info_from_pose (pose::Pose &pose)
	helper function More...
void	core::scoring::fill_bb_pos (pose::Pose const &pose, BB_Pos &bb_pos)
	helper function More...
bool	core::scoring::dimer_pairing_pointer_sorter (DimerPairingOP const &a, DimerPairingOP const &b)

Detailed Description

Scoring manager class header.

Author

Andrew Leaver-Fay (leave.nosp@m.rfa@.nosp@m.email.nosp@m..unc.nosp@m..edu)

Phil Bradley