core::pack::task::operation::TaskOperation Class Reference

#include <TaskOperation.hh>

Public Types
typedef utility::tag::TagCOP	TagCOP
typedef basic::datacache::DataMap	DataMap
typedef pose::Pose	Pose

Public Member Functions
virtual	~TaskOperation ()
virtual TaskOperationOP	clone () const =0
	Create another task operation of the type matching the most-derived version of the class. More...
virtual void	apply (Pose const &, PackerTask &) const =0
	Change a packer task in some way. The input pose is the one to which the input task will be later applied. More...
virtual void	parse_tag (TagCOP, DataMap &)
	Used to parse an xml-like tag to load parameters and properties. More...
virtual void	parse_def (utility::lua::LuaObject const &def)

Member Typedef Documentation

typedef basic::datacache::DataMap core::pack::task::operation::TaskOperation::DataMap

typedef pose::Pose core::pack::task::operation::TaskOperation::Pose

typedef utility::tag::TagCOP core::pack::task::operation::TaskOperation::TagCOP

Constructor & Destructor Documentation

core::pack::task::operation::TaskOperation::~TaskOperation ( )

virtual

Member Function Documentation

virtual void core::pack::task::operation::TaskOperation::apply ( Pose const &  , PackerTask &    ) const

pure virtual

Change a packer task in some way. The input pose is the one to which the input task will be later applied.

Implemented in core::pack::task::operation::ExtraChiCutoff, core::pack::task::operation::ExtraRotamers, core::pack::task::operation::RestrictYSDesign, core::pack::task::operation::PreventRepacking, core::pack::task::operation::PreserveCBeta, core::pack::task::operation::AppendResidueRotamerSet, core::pack::task::operation::AppendRotamerSet, core::pack::task::operation::AppendRotamer, core::pack::task::operation::SetRotamerLinks, core::pack::task::operation::SetRotamerCouplings, core::pack::task::operation::ReadResfileAndObeyLengthEvents, core::pack::task::operation::ReadResfile, core::pack::task::operation::ExtraRotamersGeneric, core::pack::task::operation::IncludeCurrent, core::pack::task::operation::InitializeExtraRotsFromCommandline, core::pack::task::operation::InitializeFromCommandline, core::pack::task::operation::RotamerExplosion, core::pack::task::operation::RestrictToInterface, core::pack::task::operation::DisallowIfNonnative, core::pack::task::operation::RestrictAbsentCanonicalAAS, core::pack::task::operation::DockingNoRepack2, core::pack::task::operation::OptH, core::pack::task::operation::OptCysHG, core::pack::task::operation::RestrictResidueToRepacking, core::pack::task::operation::NoRepackDisulfides, core::pack::task::operation::DockingNoRepack1, core::pack::task::operation::OperateOnCertainResidues, core::pack::task::operation::OperateOnResidueSubset, core::pack::task::operation::RestrictToRepacking, and core::pack::task::operation::ReplicateTask.

virtual TaskOperationOP core::pack::task::operation::TaskOperation::clone ( ) const

pure virtual

Create another task operation of the type matching the most-derived version of the class.

Implemented in core::pack::task::operation::ExtraChiCutoff, core::pack::task::operation::ExtraRotamers, core::pack::task::operation::RestrictYSDesign, core::pack::task::operation::PreventRepacking, core::pack::task::operation::PreserveCBeta, core::pack::task::operation::AppendResidueRotamerSet, core::pack::task::operation::AppendRotamerSet, core::pack::task::operation::AppendRotamer, core::pack::task::operation::SetRotamerLinks, core::pack::task::operation::SetRotamerCouplings, core::pack::task::operation::ReadResfileAndObeyLengthEvents, core::pack::task::operation::ReadResfile, core::pack::task::operation::ExtraRotamersGeneric, core::pack::task::operation::IncludeCurrent, core::pack::task::operation::InitializeExtraRotsFromCommandline, core::pack::task::operation::InitializeFromCommandline, core::pack::task::operation::RotamerExplosion, core::pack::task::operation::RestrictToInterface, core::pack::task::operation::DisallowIfNonnative, core::pack::task::operation::RestrictAbsentCanonicalAAS, core::pack::task::operation::DockingNoRepack2, core::pack::task::operation::OptH, core::pack::task::operation::RestrictResidueToRepacking, core::pack::task::operation::DockingNoRepack1, core::pack::task::operation::OptCysHG, core::pack::task::operation::NoRepackDisulfides, core::pack::task::operation::OperateOnCertainResidues, core::pack::task::operation::OperateOnResidueSubset, core::pack::task::operation::RestrictToRepacking, and core::pack::task::operation::ReplicateTask.

void core::pack::task::operation::TaskOperation::parse_def ( utility::lua::LuaObject const &  def )

virtual

Reimplemented in core::pack::task::operation::ReadResfile, core::pack::task::operation::IncludeCurrent, core::pack::task::operation::InitializeFromCommandline, core::pack::task::operation::DisallowIfNonnative, and core::pack::task::operation::RestrictToRepacking.

References utility_exit_with_message.

void core::pack::task::operation::TaskOperation::parse_tag ( TagCOP  tag, DataMap &    )

virtual

Used to parse an xml-like tag to load parameters and properties.

Reimplemented in core::pack::task::operation::ExtraChiCutoff, core::pack::task::operation::ExtraRotamers, core::pack::task::operation::PreventRepacking, core::pack::task::operation::ReadResfileAndObeyLengthEvents, core::pack::task::operation::ReadResfile, core::pack::task::operation::ExtraRotamersGeneric, core::pack::task::operation::InitializeFromCommandline, core::pack::task::operation::RotamerExplosion, core::pack::task::operation::DisallowIfNonnative, core::pack::task::operation::RestrictAbsentCanonicalAAS, core::pack::task::operation::RestrictResidueToRepacking, core::pack::task::operation::OperateOnCertainResidues, core::pack::task::operation::OperateOnResidueSubset, core::pack::task::operation::RestrictToRepacking, and core::pack::task::operation::ReplicateTask.

References utility::pointer::owning_ptr< T >::get(), and core::pack::task::operation::TR.

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The documentation for this class was generated from the following files:

• symlinks/rosetta/src/core/pack/task/operation/TaskOperation.hh
• symlinks/rosetta/src/core/pack/task/operation/TaskOperation.cc