core::pack::dunbrack::cenrot::SingleResidueCenrotLibrary Member List

This is the complete list of members for core::pack::dunbrack::cenrot::SingleResidueCenrotLibrary, including all inherited members.

AA typedef	core::pack::dunbrack::cenrot::SingleResidueCenrotLibrary
aa() const	core::pack::dunbrack::cenrot::SingleResidueCenrotLibrary	inline
aa_	core::pack::dunbrack::cenrot::SingleResidueCenrotLibrary	private
all_rots_bb_	core::pack::dunbrack::cenrot::SingleResidueCenrotLibrary	private
assign_random_rotamer_with_bias(conformation::Residue const &rsd, RotamerLibraryScratchSpace &scratch, numeric::random::RandomGenerator &RG, ChiVector &new_chi_angles, bool perturb_from_rotamer_center) const	core::pack::dunbrack::cenrot::SingleResidueCenrotLibrary	virtual
best_rotamer_energy(conformation::Residue const &rsd, bool curr_rotamer_only, RotamerLibraryScratchSpace &scratch) const	core::pack::dunbrack::cenrot::SingleResidueCenrotLibrary	virtual
bin_angle(Real const angle_start, Real const angle_step, Real const ASSERT_ONLY(angle_range), Size const nbins, Real const ang, Size &bin_lower, Size &bin_upper, Real &angle_alpha) const	core::pack::dunbrack::cenrot::SingleResidueCenrotLibrary	inlineprivate
dummy_sample_	core::pack::dunbrack::cenrot::SingleResidueCenrotLibrary	private
entropy_	core::pack::dunbrack::cenrot::SingleResidueCenrotLibrary	private
eval_rotameric_energy_bb_dof_deriv(conformation::Residue const &rsd, RotamerLibraryScratchSpace &scratch) const	core::pack::dunbrack::cenrot::SingleResidueCenrotLibrary
eval_rotameric_energy_deriv(conformation::Residue const &rsd, RotamerLibraryScratchSpace &scratch, bool eval_deriv) const	core::pack::dunbrack::cenrot::SingleResidueCenrotLibrary
fill_rotamer_vector(pose::Pose const &pose, scoring::ScoreFunction const &scorefxn, pack::task::PackerTask const &task, graph::GraphCOP packer_neighbor_graph, chemical::ResidueTypeCOP concrete_residue, conformation::Residue const &existing_residue, utility::vector1< utility::vector1< Real > > const &extra_chi_steps, bool buried, RotamerVector &rotamers) const	core::pack::dunbrack::cenrot::SingleResidueCenrotLibrary	virtual
get_closest_rotamer(conformation::Residue const &rsd, Size &nrot, Real &dis) const	core::pack::dunbrack::cenrot::SingleResidueCenrotLibrary
get_phi_from_rsd(conformation::Residue const &rsd) const	core::pack::dunbrack::cenrot::SingleResidueCenrotLibrary	private
get_phipsi_bins(Real phi, Real psi, Size &phibin, Size &psibin, Size &phibin_next, Size &psibin_next, Real &phi_alpha, Real &psi_alpha) const	core::pack::dunbrack::cenrot::SingleResidueCenrotLibrary	private
get_phipsi_bins(Real phi, Real psi, Size &phibin, Size &psibin) const	core::pack::dunbrack::cenrot::SingleResidueCenrotLibrary	private
get_psi_from_rsd(conformation::Residue const &rsd) const	core::pack::dunbrack::cenrot::SingleResidueCenrotLibrary	private
get_rotamer_samples(conformation::Residue const &rsd) const	core::pack::dunbrack::cenrot::SingleResidueCenrotLibrary
MAX_ROT_ENERGY	core::pack::dunbrack::cenrot::SingleResidueCenrotLibrary	protectedstatic
max_rot_num	core::pack::dunbrack::cenrot::SingleResidueCenrotLibrary	private
MIN_ROT_PROB	core::pack::dunbrack::cenrot::SingleResidueCenrotLibrary	protectedstatic
N_PHIPSI_BINS	core::pack::dunbrack::cenrot::SingleResidueCenrotLibrary	protectedstatic
NEUTRAL_PHI	core::pack::dunbrack::cenrot::SingleResidueCenrotLibrary	protectedstatic
NEUTRAL_PSI	core::pack::dunbrack::cenrot::SingleResidueCenrotLibrary	protectedstatic
PHIPSI_BINRANGE	core::pack::dunbrack::cenrot::SingleResidueCenrotLibrary	protectedstatic
read_from_file(utility::io::izstream &infile, bool first_line_three_letter_code_already_read)	core::pack::dunbrack::cenrot::SingleResidueCenrotLibrary
ref_energy_	core::pack::dunbrack::cenrot::SingleResidueCenrotLibrary	private
rotamer_energy(conformation::Residue const &rsd, RotamerLibraryScratchSpace &scratch) const	core::pack::dunbrack::cenrot::SingleResidueCenrotLibrary	virtual
rotamer_energy_deriv(conformation::Residue const &rsd, RotamerLibraryScratchSpace &scratch) const	core::pack::dunbrack::cenrot::SingleResidueCenrotLibrary	virtual
RSD_PHI_INDEX	core::pack::dunbrack::cenrot::SingleResidueCenrotLibrary	protectedstatic
RSD_PSI_INDEX	core::pack::dunbrack::cenrot::SingleResidueCenrotLibrary	protectedstatic
setup_entropy_correction()	core::pack::dunbrack::cenrot::SingleResidueCenrotLibrary	private
SingleResidueCenrotLibrary(AA const aa)	core::pack::dunbrack::cenrot::SingleResidueCenrotLibrary
verify_phipsi_bins(Real phi, Real psi, Size const phibin, Size const psibin, Size const phibin_next, Size const psibin_next) const	core::pack::dunbrack::cenrot::SingleResidueCenrotLibrary	private
write_to_file(utility::io::ozstream &out) const	core::pack::dunbrack::cenrot::SingleResidueCenrotLibrary	virtual
~SingleResidueCenrotLibrary()	core::pack::dunbrack::cenrot::SingleResidueCenrotLibrary	virtual
~SingleResidueRotamerLibrary()	core::pack::dunbrack::SingleResidueRotamerLibrary	virtual