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Rosetta Core
2014.16.56682
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Rosetta Core
2014.16.56682
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Polymorphic classes representing the contents of a residue-type patch file. More...
#include <core/chemical/PatchOperation.fwd.hh>#include <core/chemical/ResidueType.fwd.hh>#include <basic/Tracer.hh>#include <utility/vector1.hh>Classes | |
| class | core::chemical::PatchOperation |
| A single operation that needs to be applied in a residue patch. More... | |
| class | core::chemical::DeleteAtom |
| delete an atom More... | |
| class | core::chemical::SetBackboneHeavyatom |
| set an atom as backbone heavy atom More... | |
| class | core::chemical::SetPolymerConnectAtom |
| set an atom as polymer connection More... | |
| class | core::chemical::AddConnect |
| class | core::chemical::AddProperty |
| add a property to ResidueType More... | |
| class | core::chemical::DeleteProperty |
| delete a property from ResidueType Added by Andy M. Chen in June 2009 This is needed for deleting properties, which occurs in certain PTM's (e.g. methylation) More... | |
| class | core::chemical::AddChi |
| Add a chi angle to ResidueType. More... | |
| class | core::chemical::AddProtonChi |
| class | core::chemical::RedefineChi |
| Redefine a chi angle Added by Andy M. Chen in June 2009 This is needed for certain PTMs. More... | |
| class | core::chemical::AddChiRotamer |
| Add a rotamer sample to a chi angle of the ResidueType. More... | |
| class | core::chemical::AddAtom |
| add an atom to ResidueType More... | |
| class | core::chemical::AddBond |
| add a bond to ResidueType More... | |
| class | core::chemical::SetAtomicCharge |
| set an atom's charge More... | |
| class | core::chemical::SetAtomType |
| set atom's chemical type More... | |
| class | core::chemical::SetIO_String |
| set atom's chemical type More... | |
| class | core::chemical::SetInterchangeabilityGroup_String |
| set the interchangeability_group string for a ResidueType More... | |
| class | core::chemical::AppendInterchangeabilityGroup_String |
| Append a string to the existing interchangeability_group string for a ResidueType. More... | |
| class | core::chemical::SetMMAtomType |
| set atom's MM chemical type More... | |
| class | core::chemical::SetICoor |
| set an atom's AtomICoord More... | |
| class | core::chemical::PrependMainchainAtom |
| add a mainchain atom before the first mainchain atom More... | |
| class | core::chemical::AppendMainchainAtom |
| add a mainchain atom after the last mainchain atom More... | |
| class | core::chemical::SetNbrAtom |
| set the residue neighbor atom More... | |
| class | core::chemical::SetNbrRadius |
| set the residue neighbor radius More... | |
| class | core::chemical::SetOrientAtom |
| Set orient atom selection mode. More... | |
| class | core::chemical::NCAARotLibPath |
| set the path to a rotamer library for an NCAA that is not in dunbrack More... | |
Namespaces | |
| core | |
| A class for defining atom parameters, known as atom_types. | |
| core::chemical | |
Functions | |
| PatchOperationOP | core::chemical::patch_operation_from_patch_file_line (std::string const &line) |
| Virtual constructor, returns 0 if no match. More... | |
Polymorphic classes representing the contents of a residue-type patch file.
1.8.7