score_function_corrections.cc File Reference

Initialize Score Funciton Corrections. More...

#include <core/init/score_function_corrections.hh>
#include <basic/Tracer.hh>
#include <basic/options/option.hh>
#include <basic/options/keys/chemical.OptionKeys.gen.hh>
#include <basic/options/keys/corrections.OptionKeys.gen.hh>
#include <basic/options/keys/cryst.OptionKeys.gen.hh>
#include <basic/options/keys/ddg.OptionKeys.gen.hh>
#include <basic/options/keys/in.OptionKeys.gen.hh>
#include <basic/options/keys/out.OptionKeys.gen.hh>
#include <basic/options/keys/mistakes.OptionKeys.gen.hh>
#include <basic/options/keys/qsar.OptionKeys.gen.hh>
#include <basic/options/keys/score.OptionKeys.gen.hh>
#include <basic/options/keys/optimization.OptionKeys.gen.hh>
#include <basic/options/keys/relax.OptionKeys.gen.hh>
#include <basic/options/keys/OptionKeys.hh>
#include <core/types.hh>
#include <core/scoring/ScoreFunction.hh>
#include <core/scoring/ScoreFunctionFactory.hh>
#include <core/scoring/ScoreType.hh>
#include <istream>
#include <string>

Classes
struct	core::init::pre_talaris_2013_behavior_settings

Namespaces
	core
	A class for defining atom parameters, known as atom_types.
	core::init

Functions
void	core::init::init_revert_to_pre_talaris_2013_mistake ()
	Initialize the "revert to before Talaris2013" mistake. More...
void	core::init::revert_to_pre_talaris_2013_defaults ()
	Reset a set of flags to their pre-talaris behavior. More...
void	core::init::init_hbond_sp2_correction ()
	Initialize the hbond Sp2 correction Deprecated as Talaris2013 becomes default. More...
void	core::init::init_facts_correction ()
	Initialize the FACTS correction. More...
void	core::init::init_correct_correction ()
	Initialize the -correct correction. More...
void	core::init::init_crystal_refinement_correction ()
	Initialize the crystal refinement correction. More...
void	core::init::init_beta_correction ()
	Initialize the -beta score function. More...
void	core::init::init_nonideal_correction ()
	Initialize nonideal bond geometry correction. More...
void	core::init::init_restore_score12prime ()
	restore the the score function to the Score12prime version More...
void	core::init::init_score_function_corrections ()
	Initialize the latest and greatest score function parameters. More...
void	core::init::check_score_function_sanity (std::string const &scorefxn_key, bool warn_only=false)
	Check if a score function is requested with incompatible option flags. More...

Variables
pre_talaris_2013_behavior_settings const	core::init::restore_sc12_settings
static basic::Tracer	core::init::TR ("core.init.score_function_corrections")

Detailed Description

Initialize Score Funciton Corrections.

Author

Matthew O'Meara