core::scoring::constraints::ResidueTypeLinkingConstraint Member List

This is the complete list of members for core::scoring::constraints::ResidueTypeLinkingConstraint, including all inherited members.

AA1name	core::scoring::constraints::ResidueTypeLinkingConstraint	private
AA2name	core::scoring::constraints::ResidueTypeLinkingConstraint	private
atom(Size const ) const	core::scoring::constraints::ResidueTypeLinkingConstraint	inlinevirtual
AtomID typedef	core::scoring::constraints::Constraint
bonus_	core::scoring::constraints::ResidueTypeLinkingConstraint	private
choose_effective_sequence_separation(core::kinematics::ShortestPathInFoldTree const &sp, numeric::random::RandomGenerator &)	core::scoring::constraints::Constraint	inlinevirtual
clone() const	core::scoring::constraints::ResidueTypeLinkingConstraint	virtual
core::scoring::constraints::Constraint::clone(core::scoring::func::FuncOP) const	core::scoring::constraints::Constraint	inlinevirtual
Constraint(ScoreType const &t)	core::scoring::constraints::Constraint	inline
dist(core::pose::Pose const &) const	core::scoring::constraints::Constraint	inlinevirtual
dist(core::scoring::func::XYZ_Func const &) const	core::scoring::constraints::Constraint	inlinevirtual
effective_sequence_separation(core::kinematics::ShortestPathInFoldTree const &) const	core::scoring::constraints::Constraint	inlinevirtual
fill_f1_f2(AtomID const &atom, func::XYZ_Func const &xyz, Vector &F1, Vector &F2, EnergyMap const &weights) const	core::scoring::constraints::ResidueTypeLinkingConstraint	virtual
get_func() const	core::scoring::constraints::Constraint	inlinevirtual
natoms() const	core::scoring::constraints::ResidueTypeLinkingConstraint	inlinevirtual
operator!=(Constraint const &other) const	core::scoring::constraints::Constraint	inline
operator==(Constraint const &other) const	core::scoring::constraints::ResidueTypeLinkingConstraint	virtual
read_constraint(std::istream &, core::pose::Pose const &)	core::scoring::constraints::Constraint	inlinevirtual
read_data(std::istream &)	core::scoring::constraints::Constraint	inlinevirtual
read_def(std::istream &, pose::Pose const &, core::scoring::func::FuncFactory const &)	core::scoring::constraints::Constraint	inlinevirtual
Real typedef	core::scoring::constraints::ResidueTypeLinkingConstraint
remap_resid(core::id::SequenceMapping const &) const	core::scoring::constraints::Constraint	inlinevirtual
remapped_clone(pose::Pose const &, pose::Pose const &, id::SequenceMappingCOP map=NULL) const	core::scoring::constraints::Constraint	inlinevirtual
residues() const	core::scoring::constraints::ResidueTypeLinkingConstraint	virtual
ResidueTypeLinkingConstraint()	core::scoring::constraints::ResidueTypeLinkingConstraint
ResidueTypeLinkingConstraint(pose::Pose const &pose, Size seqpos1, Size seqpos2, Real bonus)	core::scoring::constraints::ResidueTypeLinkingConstraint
ResidueTypeLinkingConstraint(pose::Pose const &pose, Size seqpos1, Size seqpos2, std::string AA1name, std::string AA2name, Real bonus)	core::scoring::constraints::ResidueTypeLinkingConstraint
rsd1_type_name3_	core::scoring::constraints::ResidueTypeLinkingConstraint	private
rsd2_type_name3_	core::scoring::constraints::ResidueTypeLinkingConstraint	private
score(func::XYZ_Func const &xyz_func, EnergyMap const &weights, EnergyMap &emap) const	core::scoring::constraints::ResidueTypeLinkingConstraint	virtual
core::scoring::constraints::Constraint::score(conformation::Conformation const &) const	core::scoring::constraints::Constraint	inlinevirtual
score_type() const	core::scoring::constraints::Constraint	inline
seqpos1_	core::scoring::constraints::ResidueTypeLinkingConstraint	private
seqpos2_	core::scoring::constraints::ResidueTypeLinkingConstraint	private
setup_for_derivatives(core::scoring::func::XYZ_Func const &, ScoreFunction const &) const	core::scoring::constraints::Constraint	inlinevirtual
setup_for_scoring(core::scoring::func::XYZ_Func const &, ScoreFunction const &) const	core::scoring::constraints::Constraint	inlinevirtual
show(std::ostream &out) const	core::scoring::constraints::ResidueTypeLinkingConstraint	virtual
show_def(std::ostream &, pose::Pose const &) const	core::scoring::constraints::Constraint	inlinevirtual
show_violations(std::ostream &out, pose::Pose const &, Size, Real threshold=1) const	core::scoring::constraints::Constraint	virtual
steal_def(pose::Pose const &)	core::scoring::constraints::Constraint	inlinevirtual
to_string() const	core::scoring::constraints::Constraint	inline
type() const	core::scoring::constraints::Constraint	inlinevirtual
~Constraint()	core::scoring::constraints::Constraint	virtual
~ResidueTypeLinkingConstraint()	core::scoring::constraints::ResidueTypeLinkingConstraint	virtual