| ang_cst_ | core::scoring::constraints::BackboneStubLinearConstraint | privatestatic |
| atom(Size const index) const | core::scoring::constraints::BackboneStubLinearConstraint | inlinevirtual |
| atom_ids_ | core::scoring::constraints::BackboneStubLinearConstraint | private |
| AtomID typedef | core::scoring::constraints::Constraint | |
| BackboneStubLinearConstraint(pose::Pose const &pose, Size const seqpos, AtomID const &fixed_atom_id, conformation::Residue const &target_rsd, core::Real const &superposition_bonus, core::Real const &CB_force_constant) | core::scoring::constraints::BackboneStubLinearConstraint | |
| C_atom_id_ | core::scoring::constraints::BackboneStubLinearConstraint | private |
| C_N_target_ | core::scoring::constraints::BackboneStubLinearConstraint | private |
| C_target_ | core::scoring::constraints::BackboneStubLinearConstraint | private |
| CA_atom_id_ | core::scoring::constraints::BackboneStubLinearConstraint | private |
| CA_target_ | core::scoring::constraints::BackboneStubLinearConstraint | private |
| CB_atom_id_ | core::scoring::constraints::BackboneStubLinearConstraint | private |
| CB_CA_target_ | core::scoring::constraints::BackboneStubLinearConstraint | private |
| CB_force_constant_ | core::scoring::constraints::BackboneStubLinearConstraint | private |
| CB_target_ | core::scoring::constraints::BackboneStubLinearConstraint | private |
| choose_effective_sequence_separation(core::kinematics::ShortestPathInFoldTree const &sp, numeric::random::RandomGenerator &) | core::scoring::constraints::Constraint | inlinevirtual |
| clone() const | core::scoring::constraints::BackboneStubLinearConstraint | virtual |
| core::scoring::constraints::Constraint::clone(core::scoring::func::FuncOP) const | core::scoring::constraints::Constraint | inlinevirtual |
| Constraint(ScoreType const &t) | core::scoring::constraints::Constraint | inline |
| dist(core::pose::Pose const &) const | core::scoring::constraints::Constraint | inlinevirtual |
| dist(core::scoring::func::XYZ_Func const &) const | core::scoring::constraints::Constraint | inlinevirtual |
| effective_sequence_separation(core::kinematics::ShortestPathInFoldTree const &) const | core::scoring::constraints::Constraint | inlinevirtual |
| fill_f1_f2(AtomID const &atom, func::XYZ_Func const &xyz, Vector &F1, Vector &F2, EnergyMap const &weights) const | core::scoring::constraints::BackboneStubLinearConstraint | virtual |
| core::scoring::constraints::Constraint::fill_f1_f2(AtomID const &atom, core::scoring::func::XYZ_Func const &xyz_func, Vector &F1, Vector &F2, EnergyMap const &weights) const =0 | core::scoring::constraints::Constraint | pure virtual |
| fixed_atom_id_ | core::scoring::constraints::BackboneStubLinearConstraint | private |
| fixed_reference_point_ | core::scoring::constraints::BackboneStubLinearConstraint | private |
| get_func() const | core::scoring::constraints::Constraint | inlinevirtual |
| N_atom_id_ | core::scoring::constraints::BackboneStubLinearConstraint | private |
| N_target_ | core::scoring::constraints::BackboneStubLinearConstraint | private |
| natoms() const | core::scoring::constraints::BackboneStubLinearConstraint | inlinevirtual |
| operator!=(Constraint const &other) const | core::scoring::constraints::Constraint | inline |
| operator==(Constraint const &other) const | core::scoring::constraints::BackboneStubLinearConstraint | virtual |
| read_constraint(std::istream &, core::pose::Pose const &) | core::scoring::constraints::Constraint | inlinevirtual |
| read_data(std::istream &) | core::scoring::constraints::Constraint | inlinevirtual |
| read_def(std::istream &, pose::Pose const &, core::scoring::func::FuncFactory const &) | core::scoring::constraints::Constraint | inlinevirtual |
| remap_resid(core::id::SequenceMapping const &) const | core::scoring::constraints::Constraint | inlinevirtual |
| remapped_clone(pose::Pose const &src, pose::Pose const &dest, id::SequenceMappingCOP map=NULL) const | core::scoring::constraints::BackboneStubLinearConstraint | virtual |
| residues() const | core::scoring::constraints::Constraint | virtual |
| score(func::XYZ_Func const &xyz_func, EnergyMap const &weights, EnergyMap &emap) const | core::scoring::constraints::BackboneStubLinearConstraint | virtual |
| core::scoring::constraints::Constraint::score(conformation::Conformation const &) const | core::scoring::constraints::Constraint | inlinevirtual |
| score_type() const | core::scoring::constraints::Constraint | inline |
| seqpos() const | core::scoring::constraints::BackboneStubLinearConstraint | |
| seqpos_ | core::scoring::constraints::BackboneStubLinearConstraint | private |
| setup_for_derivatives(core::scoring::func::XYZ_Func const &, ScoreFunction const &) const | core::scoring::constraints::Constraint | inlinevirtual |
| setup_for_scoring(core::scoring::func::XYZ_Func const &, ScoreFunction const &) const | core::scoring::constraints::Constraint | inlinevirtual |
| show(std::ostream &out) const | core::scoring::constraints::BackboneStubLinearConstraint | virtual |
| show_def(std::ostream &, pose::Pose const &) const | core::scoring::constraints::Constraint | inlinevirtual |
| show_violations(std::ostream &out, pose::Pose const &, Size, Real threshold=1) const | core::scoring::constraints::Constraint | virtual |
| steal_def(pose::Pose const &) | core::scoring::constraints::Constraint | inlinevirtual |
| superposition_bonus_ | core::scoring::constraints::BackboneStubLinearConstraint | private |
| to_string() const | core::scoring::constraints::Constraint | inline |
| type() const | core::scoring::constraints::BackboneStubLinearConstraint | inlinevirtual |
| ~BackboneStubLinearConstraint() | core::scoring::constraints::BackboneStubLinearConstraint | inlinevirtual |
| ~Constraint() | core::scoring::constraints::Constraint | virtual |
1.8.7