EmbedSearchParamsIO.cc File Reference

Embedding Search Parameters IO class - Contains options for membrane search and score. More...

#include <core/membrane/io/EmbedSearchParamsIO.hh>
#include <core/conformation/membrane/definitions.hh>
#include <core/conformation/membrane/definitions_util.hh>
#include <core/conformation/membrane/Exceptions.hh>
#include <core/membrane/io/EmbedSearchParamsOptions.hh>
#include <basic/resource_manager/ResourceManager.hh>
#include <basic/resource_manager/util.hh>
#include <core/types.hh>
#include <basic/Tracer.hh>
#include <utility/pointer/ReferenceCount.hh>
#include <utility/vector1.hh>
#include <utility/io/izstream.hh>
#include <utility/excn/Exceptions.hh>
#include <utility/exit.hh>
#include <utility/tag/Tag.hh>
#include <algorithm>
#include <string>
#include <cstdlib>
#include <cmath>

Namespaces
	core
	A class for defining atom parameters, known as atom_types.
	core::membrane
	core::membrane::io

Macros
#define	INCLUDED_core_membrane_io_EmbedSearchParamsIO_cc

Variables
static basic::Tracer	TR ("core.membrane.io.EmbedSearchParamsIO")

Detailed Description

Embedding Search Parameters IO class - Contains options for membrane search and score.

Membrane proteins in rosetta use the membrane scoring function and an MCM embedidng search which can be tuned and adjusted using the following options.

Note

Resource Manager Component

Container class - reads straight from options class

Author

Rebecca Alford (rfalf.nosp@m.ord1.nosp@m.2@gma.nosp@m.il.c.nosp@m.om)

Macro Definition Documentation

#define INCLUDED_core_membrane_io_EmbedSearchParamsIO_cc

Variable Documentation

basic::Tracer TR("core.membrane.io.EmbedSearchParamsIO")

static

Referenced by core::membrane::io::EmbedSearchParamsIO::get_embed_params_from_file().