core::scoring::custom_pair_distance::DistanceFunc Class Reference

#include <FullatomCustomPairDistanceEnergy.hh>

Public Member Functions
	DistanceFunc (std::string const name)
	NOTE: distance functions should be input in square-distance bins. More...
virtual	~DistanceFunc ()
func::FuncOP	clone () const
virtual Real	func (Real const ) const
	Returns a value representing this function evaluated at a given point. More...
virtual Real	dfunc (Real const ) const
	Returns a value representing the derivative of this function evaluated at a given point. More...
virtual Real	max_dis () const
virtual Real	min_dis () const
Public Member Functions inherited from core::scoring::func::Func
virtual	~Func ()
	Automatically generated virtual destructor for class deriving directly from ReferenceCount. More...
virtual void	read_data (std::istream &)
	initialize this Func from the given std::istream. More...
virtual Real	estimate_dfunc (Real const r) const
	Estimates the derivative of this function at a given radius by calculating the slope of the secant line from func(r) and func(r+1e-05). More...
virtual Real	estimate_dfunc (Real const r, Real const h) const
	Estimates the derivative of this function at a given radius by calculating the slope of the secant line from func(r) and func(r+h). More...
virtual void	show (std::ostream &out) const
	Prints out space-delimited columns for r, func, dfunc and dfunc_est. The values for func, dfunc and dfunc_est are plotted as a function of r, which is varied from 2-20 in steps of 0.5. The value for dfunc_est is the estimated by the method estimate_dfunc( r ). More...
virtual void	show_definition (std::ostream &out) const
	shows the definition of this function, usually the string type of function and the parameters passed in to the constructor. More...
virtual Size	show_violations (std::ostream &out, Real r, Size verbose_level, Real threshold=1) const
	show some sort of stringified representation of the violations for this constraint. More...

Private Attributes
numeric::interpolation::HistogramCOP < Real, Real >::Type	scores_hist_

Constructor & Destructor Documentation

core::scoring::custom_pair_distance::DistanceFunc::DistanceFunc

(

std::string const

name

)

NOTE: distance functions should be input in square-distance bins.

References utility::io::izstream::close(), and basic::database::open().

Referenced by clone().

core::scoring::custom_pair_distance::DistanceFunc::~DistanceFunc ( )

virtual

Member Function Documentation

func::FuncOP core::scoring::custom_pair_distance::DistanceFunc::clone ( ) const

inlinevirtual

Implements core::scoring::func::Func.

References DistanceFunc().

Real core::scoring::custom_pair_distance::DistanceFunc::dfunc ( Real  const ) const

virtual

Returns a value representing the derivative of this function evaluated at a given point.

Implements core::scoring::func::Func.

Real core::scoring::custom_pair_distance::DistanceFunc::func ( Real  const ) const

virtual

Returns a value representing this function evaluated at a given point.

Implements core::scoring::func::Func.

Real core::scoring::custom_pair_distance::DistanceFunc::max_dis ( ) const

virtual

Real core::scoring::custom_pair_distance::DistanceFunc::min_dis ( ) const

virtual

Member Data Documentation

numeric::interpolation::HistogramCOP<Real,Real>::Type core::scoring::custom_pair_distance::DistanceFunc::scores_hist_

private

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The documentation for this class was generated from the following files:

• symlinks/rosetta/src/core/scoring/custom_pair_distance/FullatomCustomPairDistanceEnergy.hh
• symlinks/rosetta/src/core/scoring/custom_pair_distance/FullatomCustomPairDistanceEnergy.cc