core::scoring::nv::NVlookup Class Reference

#include <NVlookup.hh>

Public Member Functions
virtual	~NVlookup ()
	Automatically generated virtual destructor for class deriving directly from ReferenceCount. More...
	NVlookup (std::string filename)
core::Real	get_potentials (core::chemical::AA const &aa_type, core::Real const &score) const

Private Member Functions
void	set_up_spline_from_data (core::chemical::AA const &aa_type, utility::vector1< core::Real > const &bin_centers, utility::vector1< core::Real > const &data)

Private Attributes
utility::vector1 < numeric::interpolation::spline::InterpolatorOP >	lookup_table_

Constructor & Destructor Documentation

core::scoring::nv::NVlookup::~NVlookup ( )

virtual

Automatically generated virtual destructor for class deriving directly from ReferenceCount.

Auto-generated virtual destructor

core::scoring::nv::NVlookup::NVlookup

(

std::string

filename

)

References core::chemical::aa_from_oneletter_code(), chemical, utility::io::izstream::close(), utility::json_spirit::Value_impl< Config >::get_obj(), get_real(), utility::io::izstream::open(), utility::json_spirit::read(), and set_up_spline_from_data().

Member Function Documentation

core::Real core::scoring::nv::NVlookup::get_potentials	(	core::chemical::AA const &	aa_type,
		core::Real const &	score
	)		const

References numeric::interpolation::spline::Interpolator::interpolate(), lookup_table_, and core::chemical::num_canonical_aas.

Referenced by core::scoring::nv::NVscore::residue_energy().

void core::scoring::nv::NVlookup::set_up_spline_from_data ( core::chemical::AA const &  aa_type, utility::vector1< core::Real > const &  bin_centers, utility::vector1< core::Real > const &  data  )

private

References numeric::interpolation::spline::SplineGenerator::add_known_value(), and numeric::interpolation::spline::SplineGenerator::get_interpolator().

Referenced by NVlookup().

Member Data Documentation

utility::vector1<numeric::interpolation::spline::InterpolatorOP> core::scoring::nv::NVlookup::lookup_table_

private

Referenced by get_potentials().

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The documentation for this class was generated from the following files:

• symlinks/rosetta/src/core/scoring/nv/NVlookup.hh
• symlinks/rosetta/src/core/scoring/nv/NVlookup.cc