core::grid::CartGrid< T > Class Template Reference

#include <CartGrid.hh>

Public Types
typedef numeric::xyzVector< int >	GridPt

Public Member Functions
	CartGrid ()
virtual	~CartGrid ()
void	setBase (core::Real x, core::Real y, core::Real z)
void	setDimensions (int nX, int nY, int nZ, core::Real lX, core::Real lY, core::Real lZ)
void	set_name (std::string const &name)
std::string	get_name () const
int	longestSide () const
bool	equalDimensions (CartGrid< T > const &rhs) const
bool	equalBase (CartGrid< T > const &rhs) const
bool	is_in_grid (core::Real x, core::Real y, core::Real z) const
bool	setupZones ()
void	translate (core::Real x, core::Real y, core::Real z)
bool	setValue (int ix, int iy, int iz, T value)
bool	setValue (core::Real fx, core::Real fy, core::Real fz, T value)
T	getValue (int ix, int iy, int iz) const
T	getValue (core::Real fx, core::Real fy, core::Real fz) const
void	zero ()
void	setFullOccupied (T value)
void	clone (CartGrid< T > &copy) const
void	reset_boundaries ()
void	fluff (utility::pointer::owning_ptr< CartGrid< T > > input, utility::pointer::owning_ptr< CartGrid< T > > original, int amount=6)
void	read (std::string const &filename)
void	write (std::string const &filename) const
bool	isFullyOccupied () const
bool	isEmpty () const
utility::json_spirit::Value	serialize () const
void	deserialize (utility::json_spirit::mObject grid_data)
void	sum (utility::vector0< utility::pointer::owning_ptr< CartGrid< T > > > const &list_grids)
void	expand (int expansion)
void	split (int nsplits, int igrid, core::Real pad, utility::pointer::owning_ptr< CartGrid< T > > grid)
core::Vector	getBase () const
core::Vector	getTop () const
void	getNumberOfPoints (int &x, int &y, int &z) const
GridPt	gridpt (Vector const &coords) const
Vector	coords (GridPt const &gridpt) const
T	getValue (GridPt const &gridpt) const
T	getValue (Vector const &coords) const
T	getMinValue () const
T	getMaxValue () const
void	setValue (GridPt const &gridpt, T value)
void	setValue (Vector const &coords, T value)
void	write_to_BRIX (std::string const &filename)
void	write_to_BRIX (std::ostream &out)

Private Member Functions
void	setTop ()
void	setValue (int index, T value)
T	getValue (int index) const
int	get_index (int ix, int iy, int iz) const

Private Attributes
int	nX_
int	nY_
int	nZ_
core::Real	lX_
core::Real	lY_
core::Real	lZ_
core::Real	bX_
core::Real	bY_
core::Real	bZ_
core::Real	tX_
core::Real	tY_
core::Real	tZ_
std::string	name_
int	npoints_
bool	fullyOccupied_
T *	zones_

Member Typedef Documentation

template<typename T >

typedef numeric::xyzVector< int > core::grid::CartGrid< T >::GridPt

Constructor & Destructor Documentation

template<typename T >

core::grid::CartGrid< T >::CartGrid ( )

inline

template<typename T >

virtual core::grid::CartGrid< T >::~CartGrid ( )

inlinevirtual

References core::grid::CartGrid< T >::zones_.

Member Function Documentation

template<typename T >

void core::grid::CartGrid< T >::clone ( CartGrid< T > &  copy ) const

inline

References core::grid::CartGrid< T >::bX_, core::grid::CartGrid< T >::bY_, core::grid::CartGrid< T >::bZ_, core::grid::CartGrid< T >::lX_, core::grid::CartGrid< T >::lY_, core::grid::CartGrid< T >::lZ_, core::grid::CartGrid< T >::name_, core::grid::CartGrid< T >::npoints_, core::grid::CartGrid< T >::nX_, core::grid::CartGrid< T >::nY_, core::grid::CartGrid< T >::nZ_, core::grid::CartGrid< T >::tX_, core::grid::CartGrid< T >::tY_, core::grid::CartGrid< T >::tZ_, and core::grid::CartGrid< T >::zones_.

Referenced by core::grid::CartGrid< T >::reset_boundaries().

template<typename T >

Vector core::grid::CartGrid< T >::coords ( GridPt const &  gridpt ) const

inline

References core::grid::CartGrid< T >::bX_, core::grid::CartGrid< T >::bY_, core::grid::CartGrid< T >::bZ_, core::grid::CartGrid< T >::lX_, core::grid::CartGrid< T >::lY_, core::grid::CartGrid< T >::lZ_, numeric::xyzVector< class >::x(), numeric::xyzVector< class >::y(), and numeric::xyzVector< class >::z().

template<typename T >

void core::grid::CartGrid< T >::deserialize ( utility::json_spirit::mObject  grid_data )

inline

References utility::decode6bit(), core::grid::CartGrid< T >::set_name(), core::grid::CartGrid< T >::setBase(), core::grid::CartGrid< T >::setDimensions(), core::grid::CartGrid< T >::setupZones(), and core::grid::CartGrid< T >::zones_.

template<typename T >

bool core::grid::CartGrid< T >::equalBase ( CartGrid< T > const &  rhs ) const

inline

References core::grid::CartGrid< T >::bX_, core::grid::CartGrid< T >::bY_, and core::grid::CartGrid< T >::bZ_.

Referenced by core::grid::CartGrid< T >::sum().

template<typename T >

bool core::grid::CartGrid< T >::equalDimensions ( CartGrid< T > const &  rhs ) const

inline

References core::grid::CartGrid< T >::lX_, core::grid::CartGrid< T >::lY_, core::grid::CartGrid< T >::lZ_, core::grid::CartGrid< T >::nX_, core::grid::CartGrid< T >::nY_, and core::grid::CartGrid< T >::nZ_.

Referenced by core::grid::CartGrid< T >::sum().

template<typename T >

void core::grid::CartGrid< T >::expand ( int  expansion )

inline

References core::grid::CartGrid< T >::bX_, core::grid::CartGrid< T >::bY_, core::grid::CartGrid< T >::bZ_, core::grid::CartGrid< T >::lX_, core::grid::CartGrid< T >::lY_, core::grid::CartGrid< T >::lZ_, core::grid::CartGrid< T >::nX_, core::grid::CartGrid< T >::nY_, core::grid::CartGrid< T >::nZ_, and core::grid::CartGrid< T >::setupZones().

template<typename T >

void core::grid::CartGrid< T >::fluff ( utility::pointer::owning_ptr< CartGrid< T > >  input, utility::pointer::owning_ptr< CartGrid< T > >  original, int  amount = 6  )

inline

References j, and core::grid::CartGrid< T >::setValue().

template<typename T >

int core::grid::CartGrid< T >::get_index ( int  ix, int  iy, int  iz  ) const

inlineprivate

References core::grid::CartGrid< T >::nY_, and core::grid::CartGrid< T >::nZ_.

Referenced by core::grid::CartGrid< T >::getValue(), and core::grid::CartGrid< T >::setValue().

template<typename T >

std::string core::grid::CartGrid< T >::get_name ( ) const

inline

References core::grid::CartGrid< T >::name_.

Referenced by core::grid::CartGrid< T >::serialize(), and core::grid::CartGrid< T >::write().

template<typename T >

core::Vector core::grid::CartGrid< T >::getBase ( ) const

inline

References core::grid::CartGrid< T >::bX_, core::grid::CartGrid< T >::bY_, and core::grid::CartGrid< T >::bZ_.

template<typename T >

T core::grid::CartGrid< T >::getMaxValue ( ) const

inline

References core::grid::CartGrid< T >::npoints_, and core::grid::CartGrid< T >::zones_.

template<typename T >

T core::grid::CartGrid< T >::getMinValue ( ) const

inline

References core::grid::CartGrid< T >::npoints_, and core::grid::CartGrid< T >::zones_.

template<typename T >

void core::grid::CartGrid< T >::getNumberOfPoints ( int &  x, int &  y, int &  z  ) const

inline

References core::grid::CartGrid< T >::nX_, core::grid::CartGrid< T >::nY_, and core::grid::CartGrid< T >::nZ_.

template<typename T >

core::Vector core::grid::CartGrid< T >::getTop ( ) const

inline

References core::grid::CartGrid< T >::tX_, core::grid::CartGrid< T >::tY_, and core::grid::CartGrid< T >::tZ_.

template<typename T >

T core::grid::CartGrid< T >::getValue ( int  ix, int  iy, int  iz  ) const

inline

References core::grid::CartGrid< T >::get_index().

Referenced by core::grid::CartGrid< T >::getValue(), core::grid::CartGrid< T >::reset_boundaries(), core::grid::CartGrid< T >::split(), core::grid::CartGrid< T >::sum(), core::grid::CartGrid< T >::write(), and core::grid::CartGrid< T >::write_to_BRIX().

template<typename T >

T core::grid::CartGrid< T >::getValue ( core::Real  fx, core::Real  fy, core::Real  fz  ) const

inline

References core::grid::CartGrid< T >::bX_, core::grid::CartGrid< T >::bY_, core::grid::CartGrid< T >::bZ_, core::grid::CartGrid< T >::lX_, core::grid::CartGrid< T >::lY_, core::grid::CartGrid< T >::lZ_, core::grid::CartGrid< T >::nX_, core::grid::CartGrid< T >::nY_, core::grid::CartGrid< T >::nZ_, and core::grid::CartGrid< T >::zones_.

template<typename T >

T core::grid::CartGrid< T >::getValue ( GridPt const &  gridpt ) const

inline

References core::grid::CartGrid< T >::getValue(), numeric::xyzVector< class >::x(), numeric::xyzVector< class >::y(), and numeric::xyzVector< class >::z().

template<typename T >

T core::grid::CartGrid< T >::getValue ( Vector const &  coords ) const

inline

References core::grid::CartGrid< T >::getValue(), numeric::xyzVector< class >::x(), numeric::xyzVector< class >::y(), and numeric::xyzVector< class >::z().

template<typename T >

T core::grid::CartGrid< T >::getValue ( int  index ) const

inlineprivate

References core::grid::CartGrid< T >::npoints_, and core::grid::CartGrid< T >::zones_.

template<typename T >

GridPt core::grid::CartGrid< T >::gridpt ( Vector const &  coords ) const

inline

References core::grid::CartGrid< T >::bX_, core::grid::CartGrid< T >::bY_, core::grid::CartGrid< T >::bZ_, core::grid::CartGrid< T >::lX_, core::grid::CartGrid< T >::lY_, core::grid::CartGrid< T >::lZ_, numeric::xyzVector< class >::x(), numeric::xyzVector< class >::y(), and numeric::xyzVector< class >::z().

Referenced by core::grid::CartGrid< T >::write_to_BRIX().

template<typename T >

bool core::grid::CartGrid< T >::is_in_grid ( core::Real  x, core::Real  y, core::Real  z  ) const

inline

References core::grid::CartGrid< T >::tX_, core::grid::CartGrid< T >::tY_, and core::grid::CartGrid< T >::tZ_.

template<typename T >

bool core::grid::CartGrid< T >::isEmpty ( ) const

inline

References core::grid::CartGrid< T >::npoints_, and core::grid::CartGrid< T >::zones_.

template<typename T >

bool core::grid::CartGrid< T >::isFullyOccupied ( ) const

inline

References core::grid::CartGrid< T >::fullyOccupied_.

template<typename T >

int core::grid::CartGrid< T >::longestSide ( ) const

inline

References core::grid::CartGrid< T >::nX_, core::grid::CartGrid< T >::nY_, and core::grid::CartGrid< T >::nZ_.

template<typename T >

void core::grid::CartGrid< T >::read ( std::string const &  filename )

inline

References utility::io::izstream::close(), file, getline(), utility::io::izstream::open(), core::grid::CartGrid< T >::set_name(), core::grid::CartGrid< T >::setBase(), core::grid::CartGrid< T >::setDimensions(), core::grid::CartGrid< T >::setupZones(), and core::grid::CartGrid< T >::setValue().

template<typename T >

void core::grid::CartGrid< T >::reset_boundaries ( )

inline

References core::grid::CartGrid< T >::bX_, core::grid::CartGrid< T >::bY_, core::grid::CartGrid< T >::bZ_, core::grid::CartGrid< T >::clone(), core::grid::CartGrid< T >::getValue(), j, core::grid::CartGrid< T >::lX_, core::grid::CartGrid< T >::lY_, core::grid::CartGrid< T >::lZ_, core::grid::CartGrid< T >::nX_, core::grid::CartGrid< T >::nY_, core::grid::CartGrid< T >::nZ_, core::grid::CartGrid< T >::setupZones(), and core::grid::CartGrid< T >::setValue().

template<typename T >

utility::json_spirit::Value core::grid::CartGrid< T >::serialize ( ) const

inline

References core::grid::CartGrid< T >::bX_, core::grid::CartGrid< T >::bY_, core::grid::CartGrid< T >::bZ_, utility::encode6bit(), core::grid::CartGrid< T >::get_name(), length, core::grid::CartGrid< T >::lX_, core::grid::CartGrid< T >::lY_, core::grid::CartGrid< T >::lZ_, utility::tools::make_vector(), core::grid::CartGrid< T >::npoints_, core::grid::CartGrid< T >::nX_, core::grid::CartGrid< T >::nY_, core::grid::CartGrid< T >::nZ_, core::io::serialization::size(), and core::grid::CartGrid< T >::zones_.

template<typename T >

void core::grid::CartGrid< T >::set_name ( std::string const &  name )

inline

References core::grid::CartGrid< T >::name_.

Referenced by core::grid::CartGrid< T >::deserialize(), and core::grid::CartGrid< T >::read().

template<typename T >

void core::grid::CartGrid< T >::setBase ( core::Real  x, core::Real  y, core::Real  z  )

inline

References core::grid::CartGrid< T >::bX_, core::grid::CartGrid< T >::bY_, core::grid::CartGrid< T >::bZ_, and core::grid::CartGrid< T >::setTop().

Referenced by core::grid::CartGrid< T >::deserialize(), and core::grid::CartGrid< T >::read().

template<typename T >

void core::grid::CartGrid< T >::setDimensions ( int  nX, int  nY, int  nZ, core::Real  lX, core::Real  lY, core::Real  lZ  )

inline

References core::grid::CartGrid< T >::lX_, core::grid::CartGrid< T >::lY_, core::grid::CartGrid< T >::lZ_, core::grid::CartGrid< T >::nX_, core::grid::CartGrid< T >::nY_, core::grid::CartGrid< T >::nZ_, and core::grid::CartGrid< T >::setTop().

Referenced by core::grid::CartGrid< T >::deserialize(), and core::grid::CartGrid< T >::read().

template<typename T >

void core::grid::CartGrid< T >::setFullOccupied ( T  value )

inline

References core::grid::CartGrid< T >::fullyOccupied_, core::grid::CartGrid< T >::npoints_, and core::grid::CartGrid< T >::zones_.

template<typename T >

void core::grid::CartGrid< T >::setTop ( )

inlineprivate

References core::grid::CartGrid< T >::bX_, core::grid::CartGrid< T >::bY_, core::grid::CartGrid< T >::bZ_, core::grid::CartGrid< T >::lX_, core::grid::CartGrid< T >::lY_, core::grid::CartGrid< T >::lZ_, core::grid::CartGrid< T >::nX_, core::grid::CartGrid< T >::nY_, core::grid::CartGrid< T >::nZ_, core::grid::CartGrid< T >::tX_, core::grid::CartGrid< T >::tY_, and core::grid::CartGrid< T >::tZ_.

Referenced by core::grid::CartGrid< T >::setBase(), core::grid::CartGrid< T >::setDimensions(), and core::grid::CartGrid< T >::translate().

template<typename T >

bool core::grid::CartGrid< T >::setupZones ( )

inline

References core::grid::CartGrid< T >::npoints_, core::grid::CartGrid< T >::nX_, core::grid::CartGrid< T >::nY_, core::grid::CartGrid< T >::nZ_, and core::grid::CartGrid< T >::zones_.

Referenced by core::grid::CartGrid< T >::deserialize(), core::grid::CartGrid< T >::expand(), core::grid::CartGrid< T >::read(), and core::grid::CartGrid< T >::reset_boundaries().

template<typename T >

bool core::grid::CartGrid< T >::setValue ( int  ix, int  iy, int  iz, T  value  )

inline

References core::grid::CartGrid< T >::fullyOccupied_, core::grid::CartGrid< T >::get_index(), core::grid::CartGrid< T >::npoints_, and core::grid::CartGrid< T >::zones_.

Referenced by core::grid::CartGrid< T >::fluff(), core::grid::CartGrid< T >::read(), core::grid::CartGrid< T >::reset_boundaries(), core::grid::CartGrid< T >::setValue(), and core::grid::CartGrid< T >::sum().

template<typename T >

bool core::grid::CartGrid< T >::setValue ( core::Real  fx, core::Real  fy, core::Real  fz, T  value  )

inline

References core::grid::CartGrid< T >::bX_, core::grid::CartGrid< T >::bY_, core::grid::CartGrid< T >::bZ_, core::grid::CartGrid< T >::fullyOccupied_, core::grid::CartGrid< T >::get_index(), core::grid::CartGrid< T >::lX_, core::grid::CartGrid< T >::lY_, core::grid::CartGrid< T >::lZ_, core::grid::CartGrid< T >::npoints_, core::grid::CartGrid< T >::nX_, core::grid::CartGrid< T >::nY_, core::grid::CartGrid< T >::nZ_, and core::grid::CartGrid< T >::zones_.

template<typename T >

void core::grid::CartGrid< T >::setValue ( GridPt const &  gridpt, T  value  )

inline

References core::grid::CartGrid< T >::setValue(), numeric::xyzVector< class >::x(), numeric::xyzVector< class >::y(), and numeric::xyzVector< class >::z().

template<typename T >

void core::grid::CartGrid< T >::setValue ( Vector const &  coords, T  value  )

inline

References core::grid::CartGrid< T >::setValue(), numeric::xyzVector< class >::x(), numeric::xyzVector< class >::y(), and numeric::xyzVector< class >::z().

template<typename T >

void core::grid::CartGrid< T >::setValue ( int  index, T  value  )

inlineprivate

References core::grid::CartGrid< T >::fullyOccupied_, core::grid::CartGrid< T >::npoints_, and core::grid::CartGrid< T >::zones_.

template<typename T >

void core::grid::CartGrid< T >::split ( int  nsplits, int  igrid, core::Real  pad, utility::pointer::owning_ptr< CartGrid< T > >  grid  )

inline

References core::grid::CartGrid< T >::bX_, core::grid::CartGrid< T >::bY_, core::grid::CartGrid< T >::bZ_, core::grid::CartGrid< T >::getValue(), grid, j, core::grid::CartGrid< T >::lX_, core::grid::CartGrid< T >::lY_, core::grid::CartGrid< T >::lZ_, core::grid::CartGrid< T >::nX_, core::grid::CartGrid< T >::nY_, core::grid::CartGrid< T >::nZ_, and utility_exit_with_message.

template<typename T >

void core::grid::CartGrid< T >::sum ( utility::vector0< utility::pointer::owning_ptr< CartGrid< T > > > const &  list_grids )

inline

References core::grid::CartGrid< T >::equalBase(), core::grid::CartGrid< T >::equalDimensions(), core::grid::CartGrid< T >::getValue(), j, core::grid::CartGrid< T >::setValue(), and core::grid::CartGrid< T >::zero().

template<typename T >

void core::grid::CartGrid< T >::translate ( core::Real  x, core::Real  y, core::Real  z  )

inline

References core::grid::CartGrid< T >::bX_, core::grid::CartGrid< T >::bY_, core::grid::CartGrid< T >::bZ_, and core::grid::CartGrid< T >::setTop().

template<typename T >

void core::grid::CartGrid< T >::write ( std::string const &  filename ) const

inline

References core::grid::CartGrid< T >::bX_, core::grid::CartGrid< T >::bY_, core::grid::CartGrid< T >::bZ_, file, core::grid::CartGrid< T >::get_name(), core::grid::CartGrid< T >::getValue(), j, core::grid::CartGrid< T >::lX_, core::grid::CartGrid< T >::lY_, core::grid::CartGrid< T >::lZ_, core::grid::CartGrid< T >::nX_, core::grid::CartGrid< T >::nY_, and core::grid::CartGrid< T >::nZ_.

template<typename T >

void core::grid::CartGrid< T >::write_to_BRIX ( std::string const &  filename )

inline

This format was choosen because it's space-efficient for small integer values (such as are typically stored in grids) and PyMOL can read it. Typical extension is .brix or .omap

References out.

template<typename T >

void core::grid::CartGrid< T >::write_to_BRIX ( std::ostream &  out )

inline

References core::grid::CartGrid< T >::getValue(), core::grid::CartGrid< T >::gridpt(), core::grid::CartGrid< T >::lX_, core::grid::CartGrid< T >::lY_, core::grid::CartGrid< T >::lZ_, core::grid::CartGrid< T >::nX_, core::grid::CartGrid< T >::nY_, core::grid::CartGrid< T >::nZ_, numeric::xyzVector< class >::x(), numeric::xyzVector< class >::y(), and numeric::xyzVector< class >::z().

template<typename T >

void core::grid::CartGrid< T >::zero ( )

inline

References core::grid::CartGrid< T >::npoints_, and core::grid::CartGrid< T >::zones_.

Referenced by core::grid::CartGrid< T >::sum().

Member Data Documentation

template<typename T >

core::Real core::grid::CartGrid< T >::bX_

private

Referenced by core::grid::CartGrid< T >::clone(), core::grid::CartGrid< T >::coords(), core::grid::CartGrid< T >::equalBase(), core::grid::CartGrid< T >::expand(), core::grid::CartGrid< T >::getBase(), core::grid::CartGrid< T >::getValue(), core::grid::CartGrid< T >::gridpt(), core::grid::CartGrid< T >::reset_boundaries(), core::grid::CartGrid< T >::serialize(), core::grid::CartGrid< T >::setBase(), core::grid::CartGrid< T >::setTop(), core::grid::CartGrid< T >::setValue(), core::grid::CartGrid< T >::split(), core::grid::CartGrid< T >::translate(), and core::grid::CartGrid< T >::write().

template<typename T >

core::Real core::grid::CartGrid< T >::bY_

private

Referenced by core::grid::CartGrid< T >::clone(), core::grid::CartGrid< T >::coords(), core::grid::CartGrid< T >::equalBase(), core::grid::CartGrid< T >::expand(), core::grid::CartGrid< T >::getBase(), core::grid::CartGrid< T >::getValue(), core::grid::CartGrid< T >::gridpt(), core::grid::CartGrid< T >::reset_boundaries(), core::grid::CartGrid< T >::serialize(), core::grid::CartGrid< T >::setBase(), core::grid::CartGrid< T >::setTop(), core::grid::CartGrid< T >::setValue(), core::grid::CartGrid< T >::split(), core::grid::CartGrid< T >::translate(), and core::grid::CartGrid< T >::write().

template<typename T >

core::Real core::grid::CartGrid< T >::bZ_

private

Referenced by core::grid::CartGrid< T >::clone(), core::grid::CartGrid< T >::coords(), core::grid::CartGrid< T >::equalBase(), core::grid::CartGrid< T >::expand(), core::grid::CartGrid< T >::getBase(), core::grid::CartGrid< T >::getValue(), core::grid::CartGrid< T >::gridpt(), core::grid::CartGrid< T >::reset_boundaries(), core::grid::CartGrid< T >::serialize(), core::grid::CartGrid< T >::setBase(), core::grid::CartGrid< T >::setTop(), core::grid::CartGrid< T >::setValue(), core::grid::CartGrid< T >::split(), core::grid::CartGrid< T >::translate(), and core::grid::CartGrid< T >::write().

template<typename T >

bool core::grid::CartGrid< T >::fullyOccupied_

private

Referenced by core::grid::CartGrid< T >::isFullyOccupied(), core::grid::CartGrid< T >::setFullOccupied(), and core::grid::CartGrid< T >::setValue().

template<typename T >

core::Real core::grid::CartGrid< T >::lX_

private

Referenced by core::grid::CartGrid< T >::clone(), core::grid::CartGrid< T >::coords(), core::grid::CartGrid< T >::equalDimensions(), core::grid::CartGrid< T >::expand(), core::grid::CartGrid< T >::getValue(), core::grid::CartGrid< T >::gridpt(), core::grid::CartGrid< T >::reset_boundaries(), core::grid::CartGrid< T >::serialize(), core::grid::CartGrid< T >::setDimensions(), core::grid::CartGrid< T >::setTop(), core::grid::CartGrid< T >::setValue(), core::grid::CartGrid< T >::split(), core::grid::CartGrid< T >::write(), and core::grid::CartGrid< T >::write_to_BRIX().

template<typename T >

core::Real core::grid::CartGrid< T >::lY_

private

Referenced by core::grid::CartGrid< T >::clone(), core::grid::CartGrid< T >::coords(), core::grid::CartGrid< T >::equalDimensions(), core::grid::CartGrid< T >::expand(), core::grid::CartGrid< T >::getValue(), core::grid::CartGrid< T >::gridpt(), core::grid::CartGrid< T >::reset_boundaries(), core::grid::CartGrid< T >::serialize(), core::grid::CartGrid< T >::setDimensions(), core::grid::CartGrid< T >::setTop(), core::grid::CartGrid< T >::setValue(), core::grid::CartGrid< T >::split(), core::grid::CartGrid< T >::write(), and core::grid::CartGrid< T >::write_to_BRIX().

template<typename T >

core::Real core::grid::CartGrid< T >::lZ_

private

Referenced by core::grid::CartGrid< T >::clone(), core::grid::CartGrid< T >::coords(), core::grid::CartGrid< T >::equalDimensions(), core::grid::CartGrid< T >::expand(), core::grid::CartGrid< T >::getValue(), core::grid::CartGrid< T >::gridpt(), core::grid::CartGrid< T >::reset_boundaries(), core::grid::CartGrid< T >::serialize(), core::grid::CartGrid< T >::setDimensions(), core::grid::CartGrid< T >::setTop(), core::grid::CartGrid< T >::setValue(), core::grid::CartGrid< T >::split(), core::grid::CartGrid< T >::write(), and core::grid::CartGrid< T >::write_to_BRIX().

template<typename T >

std::string core::grid::CartGrid< T >::name_

private

Referenced by core::grid::CartGrid< T >::clone(), core::grid::CartGrid< T >::get_name(), and core::grid::CartGrid< T >::set_name().

template<typename T >

int core::grid::CartGrid< T >::npoints_

private

Referenced by core::grid::CartGrid< T >::clone(), core::grid::CartGrid< T >::getMaxValue(), core::grid::CartGrid< T >::getMinValue(), core::grid::CartGrid< T >::getValue(), core::grid::CartGrid< T >::isEmpty(), core::grid::CartGrid< T >::serialize(), core::grid::CartGrid< T >::setFullOccupied(), core::grid::CartGrid< T >::setupZones(), core::grid::CartGrid< T >::setValue(), and core::grid::CartGrid< T >::zero().

template<typename T >

int core::grid::CartGrid< T >::nX_

private

Referenced by core::grid::CartGrid< T >::clone(), core::grid::CartGrid< T >::equalDimensions(), core::grid::CartGrid< T >::expand(), core::grid::CartGrid< T >::getNumberOfPoints(), core::grid::CartGrid< T >::getValue(), core::grid::CartGrid< T >::longestSide(), core::grid::CartGrid< T >::reset_boundaries(), core::grid::CartGrid< T >::serialize(), core::grid::CartGrid< T >::setDimensions(), core::grid::CartGrid< T >::setTop(), core::grid::CartGrid< T >::setupZones(), core::grid::CartGrid< T >::setValue(), core::grid::CartGrid< T >::split(), core::grid::CartGrid< T >::write(), and core::grid::CartGrid< T >::write_to_BRIX().

template<typename T >

int core::grid::CartGrid< T >::nY_

private

Referenced by core::grid::CartGrid< T >::clone(), core::grid::CartGrid< T >::equalDimensions(), core::grid::CartGrid< T >::expand(), core::grid::CartGrid< T >::get_index(), core::grid::CartGrid< T >::getNumberOfPoints(), core::grid::CartGrid< T >::getValue(), core::grid::CartGrid< T >::longestSide(), core::grid::CartGrid< T >::reset_boundaries(), core::grid::CartGrid< T >::serialize(), core::grid::CartGrid< T >::setDimensions(), core::grid::CartGrid< T >::setTop(), core::grid::CartGrid< T >::setupZones(), core::grid::CartGrid< T >::setValue(), core::grid::CartGrid< T >::split(), core::grid::CartGrid< T >::write(), and core::grid::CartGrid< T >::write_to_BRIX().

template<typename T >

int core::grid::CartGrid< T >::nZ_

private

Referenced by core::grid::CartGrid< T >::clone(), core::grid::CartGrid< T >::equalDimensions(), core::grid::CartGrid< T >::expand(), core::grid::CartGrid< T >::get_index(), core::grid::CartGrid< T >::getNumberOfPoints(), core::grid::CartGrid< T >::getValue(), core::grid::CartGrid< T >::longestSide(), core::grid::CartGrid< T >::reset_boundaries(), core::grid::CartGrid< T >::serialize(), core::grid::CartGrid< T >::setDimensions(), core::grid::CartGrid< T >::setTop(), core::grid::CartGrid< T >::setupZones(), core::grid::CartGrid< T >::setValue(), core::grid::CartGrid< T >::split(), core::grid::CartGrid< T >::write(), and core::grid::CartGrid< T >::write_to_BRIX().

template<typename T >

core::Real core::grid::CartGrid< T >::tX_

private

Referenced by core::grid::CartGrid< T >::clone(), core::grid::CartGrid< T >::getTop(), core::grid::CartGrid< T >::is_in_grid(), and core::grid::CartGrid< T >::setTop().

template<typename T >

core::Real core::grid::CartGrid< T >::tY_

private

Referenced by core::grid::CartGrid< T >::clone(), core::grid::CartGrid< T >::getTop(), core::grid::CartGrid< T >::is_in_grid(), and core::grid::CartGrid< T >::setTop().

template<typename T >

core::Real core::grid::CartGrid< T >::tZ_

private

Referenced by core::grid::CartGrid< T >::clone(), core::grid::CartGrid< T >::getTop(), core::grid::CartGrid< T >::is_in_grid(), and core::grid::CartGrid< T >::setTop().

template<typename T >

T* core::grid::CartGrid< T >::zones_

private

Referenced by core::grid::CartGrid< T >::clone(), core::grid::CartGrid< T >::deserialize(), core::grid::CartGrid< T >::getMaxValue(), core::grid::CartGrid< T >::getMinValue(), core::grid::CartGrid< T >::getValue(), core::grid::CartGrid< T >::isEmpty(), core::grid::CartGrid< T >::serialize(), core::grid::CartGrid< T >::setFullOccupied(), core::grid::CartGrid< T >::setupZones(), core::grid::CartGrid< T >::setValue(), core::grid::CartGrid< T >::zero(), and core::grid::CartGrid< T >::~CartGrid().

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The documentation for this class was generated from the following files:

• symlinks/rosetta/src/core/grid/CartGrid.fwd.hh
• symlinks/rosetta/src/core/grid/CartGrid.hh