core::scoring::constraints::AtomPairConstraint Member List

This is the complete list of members for core::scoring::constraints::AtomPairConstraint, including all inherited members.

atom(Size const n) const	core::scoring::constraints::AtomPairConstraint	inlinevirtual
atom1_	core::scoring::constraints::AtomPairConstraint	mutableprotected
atom2_	core::scoring::constraints::AtomPairConstraint	mutableprotected
AtomID typedef	core::scoring::constraints::Constraint
AtomPairConstraint()	core::scoring::constraints::AtomPairConstraint	inline
AtomPairConstraint(AtomID const &a1, AtomID const &a2, core::scoring::func::FuncOP func, ScoreType scoretype=atom_pair_constraint)	core::scoring::constraints::AtomPairConstraint	inline
choose_effective_sequence_separation(core::kinematics::ShortestPathInFoldTree const &sp, numeric::random::RandomGenerator &)	core::scoring::constraints::Constraint	inlinevirtual
clone() const	core::scoring::constraints::AtomPairConstraint	inlinevirtual
clone(core::scoring::func::FuncOP func) const	core::scoring::constraints::AtomPairConstraint	inlinevirtual
Constraint(ScoreType const &t)	core::scoring::constraints::Constraint	inline
dfunc(Real const theta) const	core::scoring::constraints::AtomPairConstraint	inlineprivate
dist(pose::Pose const &pose) const	core::scoring::constraints::AtomPairConstraint	virtual
dist(core::conformation::Conformation const &conformation) const	core::scoring::constraints::AtomPairConstraint
dist(core::scoring::func::XYZ_Func const &xyz) const	core::scoring::constraints::AtomPairConstraint	virtual
effective_sequence_separation(core::kinematics::ShortestPathInFoldTree const &sp) const	core::scoring::constraints::AtomPairConstraint	virtual
fill_f1_f2(AtomID const &atom, core::scoring::func::XYZ_Func const &xyz, Vector &F1, Vector &F2, EnergyMap const &weights) const	core::scoring::constraints::AtomPairConstraint	virtual
func(Real const theta) const	core::scoring::constraints::AtomPairConstraint	inlineprivate
func_	core::scoring::constraints::AtomPairConstraint	protected
get_func() const	core::scoring::constraints::AtomPairConstraint	inlinevirtual
natoms() const	core::scoring::constraints::AtomPairConstraint	inlinevirtual
operator!=(Constraint const &other) const	core::scoring::constraints::Constraint	inline
operator==(Constraint const &other) const	core::scoring::constraints::AtomPairConstraint	virtual
read_constraint(std::istream &, core::pose::Pose const &)	core::scoring::constraints::Constraint	inlinevirtual
read_data(std::istream &)	core::scoring::constraints::Constraint	inlinevirtual
read_def(std::istream &in, pose::Pose const &pose, func::FuncFactory const &func_factory)	core::scoring::constraints::AtomPairConstraint	virtual
remap_resid(core::id::SequenceMapping const &seqmap) const	core::scoring::constraints::AtomPairConstraint	virtual
remapped_clone(pose::Pose const &src, pose::Pose const &dest, id::SequenceMappingCOP map=NULL) const	core::scoring::constraints::AtomPairConstraint	virtual
residues() const	core::scoring::constraints::Constraint	virtual
score(Vector const &xyz1, Vector const &xyz2) const	core::scoring::constraints::AtomPairConstraint
score(core::scoring::func::XYZ_Func const &xyz, EnergyMap const &, EnergyMap &emap) const	core::scoring::constraints::AtomPairConstraint	virtual
score(pose::Pose const &pose) const	core::scoring::constraints::AtomPairConstraint	inline
core::scoring::constraints::Constraint::score(conformation::Conformation const &) const	core::scoring::constraints::Constraint	inlinevirtual
score_type() const	core::scoring::constraints::Constraint	inline
setup_for_derivatives(core::scoring::func::XYZ_Func const &, ScoreFunction const &) const	core::scoring::constraints::Constraint	inlinevirtual
setup_for_scoring(core::scoring::func::XYZ_Func const &, ScoreFunction const &) const	core::scoring::constraints::Constraint	inlinevirtual
show(std::ostream &out) const	core::scoring::constraints::AtomPairConstraint	virtual
show_def(std::ostream &out, pose::Pose const &pose) const	core::scoring::constraints::AtomPairConstraint	virtual
show_violations(std::ostream &out, pose::Pose const &pose, Size verbose_level, Real threshold=1) const	core::scoring::constraints::AtomPairConstraint	virtual
steal_def(pose::Pose const &)	core::scoring::constraints::Constraint	inlinevirtual
to_string() const	core::scoring::constraints::Constraint	inline
type() const	core::scoring::constraints::AtomPairConstraint	inlinevirtual
~Constraint()	core::scoring::constraints::Constraint	virtual