core::conformation::membrane Namespace Reference

Classes
struct	EmbedConfigInfo
	Struct EmbedConfigInfo. More...
struct	EmbedSearchParams
	Struct Embedding Search Info. More...
class	EXCN_Illegal_Arguments
	Illegal Arguments Exception. More...
class	EXCN_Membrane
	Parent Exception - Exception Membrane. More...
class	EXCN_Membrane_Bounds
	Membrane Out of Bounds Exception. More...
class	EXCN_MembraneFoldTree
	Fold tree Exception for membrane proteins. More...
class	EXCN_NonMembrane
	Non Membrane Pose Exception. More...
class	EXCN_Resource_Definition
	Resource Manager Exception. More...
class	EXCN_VirtualRsd
	Virtual Residue Definition Exception. More...
class	LipidAccInfo
	Membrane Lipid Accessibility Data. More...
class	MembraneInfo
	A Membrane conformation: Additional data for maintaining a mebrane. More...
class	SpanningTopology
	Class: Membrane Spanning Topology. More...

Typedefs
typedef utility::pointer::owning_ptr < EmbedConfigInfo >	EmbedConfigInfoOP
typedef utility::pointer::owning_ptr < EmbedConfigInfo const >	EmbedConfigInfoCOP
typedef utility::pointer::owning_ptr < EmbedSearchParams >	EmbedSearchParamsOP
typedef utility::pointer::owning_ptr < EmbedSearchParams const >	EmbedSearchParamsCOP
typedef utility::pointer::owning_ptr < LipidAccInfo >	LipidAccInfoOP
typedef utility::pointer::owning_ptr < LipidAccInfo const >	LipidAccInfoCOP
typedef utility::pointer::owning_ptr < MembraneInfo >	MembraneInfoOP
typedef utility::pointer::owning_ptr < MembraneInfo const >	MembraneInfoCOP
typedef utility::pointer::owning_ptr < SpanningTopology >	SpanningTopologyOP
typedef utility::pointer::owning_ptr < SpanningTopology const >	SpanningTopologyCOP

Functions
EmbedConfigInfoOP	init_embedConfigInfo ()
	EmbedConfigInfo initialization. More...
EmbedSearchParamsOP	init_EmbedSearchParams ()
	EmbedSearchParams initialization. More...

Typedef Documentation

typedef utility::pointer::owning_ptr< EmbedConfigInfo const > core::conformation::membrane::EmbedConfigInfoCOP

typedef utility::pointer::owning_ptr< EmbedConfigInfo > core::conformation::membrane::EmbedConfigInfoOP

typedef utility::pointer::owning_ptr< EmbedSearchParams const > core::conformation::membrane::EmbedSearchParamsCOP

typedef utility::pointer::owning_ptr< EmbedSearchParams > core::conformation::membrane::EmbedSearchParamsOP

typedef utility::pointer::owning_ptr< LipidAccInfo const > core::conformation::membrane::LipidAccInfoCOP

typedef utility::pointer::owning_ptr< LipidAccInfo > core::conformation::membrane::LipidAccInfoOP

typedef utility::pointer::owning_ptr< MembraneInfo const > core::conformation::membrane::MembraneInfoCOP

typedef utility::pointer::owning_ptr< MembraneInfo > core::conformation::membrane::MembraneInfoOP

typedef utility::pointer::owning_ptr< SpanningTopology const > core::conformation::membrane::SpanningTopologyCOP

typedef utility::pointer::owning_ptr< SpanningTopology > core::conformation::membrane::SpanningTopologyOP

Function Documentation

EmbedConfigInfoOP core::conformation::membrane::init_embedConfigInfo

(

)

EmbedConfigInfo initialization.

Parameters

[none]

Referenced by core::membrane::io::EmbedDefIO::get_embedding_from_file().

EmbedSearchParamsOP core::conformation::membrane::init_EmbedSearchParams

(

)

EmbedSearchParams initialization.

Parameters

[none]

Referenced by core::membrane::io::EmbedSearchParamsIO::get_embed_params_from_file().