database_io.cc File Reference

Database input/output function definitions for carbohydrate-specific data. More...

#include <core/chemical/carbohydrates/database_io.hh>
#include <core/types.hh>
#include <utility/exit.hh>
#include <utility/string_util.hh>
#include <utility/file/file_sys_util.hh>
#include <utility/io/izstream.hh>
#include <basic/Tracer.hh>
#include <sstream>

Namespaces
	core
	A class for defining atom parameters, known as atom_types.
	core::chemical
	core::chemical::carbohydrates

Functions
utility::vector1< std::string >	core::chemical::carbohydrates::get_lines_from_file_data (std::string const &filename)
	Local method that opens a file and returns its data as a list of lines after checking for errors. More...
utility::vector1< std::string >	core::chemical::carbohydrates::read_properties_from_database_file (std::string const &filename)
	Return a list of strings, which are saccharide-specific properties and modifications, read from a database file. More...
std::map< std::string, std::string >	core::chemical::carbohydrates::read_codes_and_roots_from_database_file (std::string const &filename)
	Return a map of strings to strings, which are saccharide-specific 3-letter codes mapped to IUPAC roots, read from a database file. More...

Variables
static basic::Tracer	TR ("core.chemical.carbohydrates.database_io")

Detailed Description

Database input/output function definitions for carbohydrate-specific data.

Author

Labonte

Variable Documentation

basic::Tracer TR("core.chemical.carbohydrates.database_io")

static