SequenceAlignment.hh File Reference

class definition for a multiple sequence alignment More...

#include <map>
#include <string>
#include <boost/functional/hash.hpp>
#include <utility/vector1_bool.hh>
#include <utility/pointer/ReferenceCount.hh>
#include <core/types.hh>
#include <core/id/SequenceMapping.hh>
#include <core/sequence/Sequence.hh>
#include <core/sequence/ScoringScheme.fwd.hh>
#include <core/sequence/SequenceAlignment.fwd.hh>
#include <utility/vector1.hh>

Classes
class	core::sequence::SequenceAlignment
struct	core::sequence::SequenceAlignmentHasher

Namespaces
	core
	A class for defining atom parameters, known as atom_types.
	core::sequence

Detailed Description

class definition for a multiple sequence alignment

Author

James Thompson