scoring → id Relation

File in symlinks/rosetta/src/core/scoring	Includes file in symlinks/rosetta/src/core/id
constraints / AmbiguousConstraint.hh	AtomID.hh
constraints / AmbiguousConstraint.hh	SequenceMapping.fwd.hh
constraints / AmbiguousNMRConstraint.hh	AtomID.hh
constraints / AmbiguousNMRDistanceConstraint.cc	AtomID.hh
constraints / AmbiguousNMRDistanceConstraint.cc	NamedAtomID.hh
constraints / AmbiguousNMRDistanceConstraint.cc	SequenceMapping.hh
constraints / AmbiguousNMRDistanceConstraint.hh	AtomID.hh
constraints / AmbiguousNMRDistanceConstraint.hh	NamedAtomID.hh
constraints / AngleConstraint.cc	AtomID.hh
constraints / AngleConstraint.cc	NamedAtomID.hh
constraints / AngleConstraint.cc	SequenceMapping.hh
constraints / AngleConstraint.hh	AtomID.fwd.hh
constraints / AngleConstraint.hh	AtomID.hh
constraints / AtomPairConstraint.cc	AtomID.hh
constraints / AtomPairConstraint.cc	NamedAtomID.hh
constraints / AtomPairConstraint.cc	SequenceMapping.hh
constraints / AtomPairConstraint.hh	AtomID.hh
constraints / BackboneStubConstraint.cc	SequenceMapping.hh
constraints / BackboneStubLinearConstraint.cc	SequenceMapping.hh
etable / BaseEtableEnergy.tmpl.hh	AtomID.fwd.hh
etable / BaseEtableEnergy.tmpl.hh	AtomID.hh
etable / BaseEtableEnergy.tmpl.hh	AtomID_Map.fwd.hh
etable / BaseEtableEnergy.tmpl.hh	AtomID_Map.hh
etable / BaseEtableEnergy.tmpl.hh	AtomID_Mask.fwd.hh
etable / BaseEtableEnergy.tmpl.hh	DOF_ID.fwd.hh
etable / BaseEtableEnergy.tmpl.hh	DOF_ID.hh
etable / BaseEtableEnergy.tmpl.hh	DOF_ID_Map.fwd.hh
etable / BaseEtableEnergy.tmpl.hh	DOF_ID_Map.hh
etable / BaseEtableEnergy.tmpl.hh	DOF_ID_Mask.fwd.hh
etable / BaseEtableEnergy.tmpl.hh	NamedAtomID.fwd.hh
etable / BaseEtableEnergy.tmpl.hh	NamedAtomID.hh
etable / BaseEtableEnergy.tmpl.hh	NamedStubID.fwd.hh
etable / BaseEtableEnergy.tmpl.hh	SequenceMapping.fwd.hh
etable / BaseEtableEnergy.tmpl.hh	TorsionID.fwd.hh
etable / BaseEtableEnergy.tmpl.hh	TorsionID.hh
etable / BaseEtableEnergy.tmpl.hh	types.hh
constraints / BigBinConstraint.hh	AtomID.hh
methods / CartesianBondedEnergy.cc	DOF_ID.hh
methods / CartesianBondedEnergy.cc	TorsionID.hh
methods / ChainbreakEnergy.cc	AtomID.hh
methods / ChemicalShiftAnisotropyEnergy.cc	NamedAtomID.hh
methods / ChemicalShiftAnisotropyEnergy.hh	AtomID_Map.hh
packing / compute_holes_score_res.hh	AtomID_Map.hh
packstat / compute_sasa.hh	AtomID_Map.fwd.hh
constraints / ConstantConstraint.cc	AtomID.hh
constraints / ConstantConstraint.hh	AtomID.fwd.hh
constraints / Constraint.cc	AtomID.hh
constraints / Constraint.hh	AtomID.fwd.hh
constraints / Constraint.hh	SequenceMapping.hh
constraints / ConstraintIO.cc	AtomID.hh
constraints / Constraints.hh	AtomID.fwd.hh
constraints / ConstraintsEnergy.hh	TorsionID.fwd.hh
constraints / ConstraintSet.cc	SequenceMapping.hh
constraints / ConstraintSet.hh	AtomID.fwd.hh
constraints / ConstraintSet.hh	DOF_ID.fwd.hh
constraints / ConstraintSet.hh	SequenceMapping.fwd.hh
methods / ContextDependentTwoBodyEnergy.hh	DOF_ID.fwd.hh
methods / ContextDependentTwoBodyEnergy.hh	TorsionID.fwd.hh
geometric_solvation / ContextIndependentGeometricSolEnergy.cc	AtomID.hh
constraints / CoordinateConstraint.cc	AtomID.hh
constraints / CoordinateConstraint.cc	NamedAtomID.hh
constraints / CoordinateConstraint.cc	SequenceMapping.hh
constraints / CoordinateConstraint.hh	AtomID.hh
methods / CustomAtomPairEnergy.cc	AtomID.hh
constraints / DihedralConstraint.cc	NamedAtomID.hh
constraints / DihedralConstraint.cc	SequenceMapping.hh
constraints / DihedralConstraint.hh	AtomID.hh
constraints / DihedralPairConstraint.cc	NamedAtomID.hh
constraints / DihedralPairConstraint.cc	SequenceMapping.hh
constraints / DihedralPairConstraint.hh	AtomID.hh
methods / DipolarCouplingEnergy.cc	NamedAtomID.hh
methods / DipolarCouplingEnergy.hh	AtomID_Map.hh
constraints / DistancePairConstraint.cc	NamedAtomID.hh
constraints / DistancePairConstraint.cc	SequenceMapping.hh
constraints / DistancePairConstraint.hh	AtomID.hh
disulfides / DisulfideMatchingPotential.cc	DOF_ID_Mask.fwd.hh
methods / DNA_BaseEnergy.cc	AtomID.hh
dna / DNAChiEnergy.cc	TorsionID.hh
dna / DNATorsionEnergy.cc	TorsionID.hh
constraints / DOF_Constraint.hh	DOF_ID.hh
dssp / Dssp.cc	AtomID.hh
dssp / Dssp.cc	NamedAtomID.hh
electron_density_atomwise / ElecDensAtomwiseEnergy.cc	AtomID.hh
electron_density_atomwise / ElecDensAtomwiseEnergy.hh	DOF_ID.fwd.hh
electron_density_atomwise / ElecDensAtomwiseEnergy.hh	TorsionID.fwd.hh
electron_density / ElectronDensity.cc	AtomID.hh
electron_density_atomwise / ElectronDensityAtomwise.cc	AtomID.hh
Energies.cc	AtomID.hh
Energies.hh	AtomID.fwd.hh
Energies.hh	AtomID_Mask.fwd.hh
methods / EnergyMethod.hh	AtomID.fwd.hh
methods / EnvSmoothEnergy.cc	AtomID.hh
geometric_solvation / ExactOccludedHbondSolEnergy.cc	AtomID.hh
geometric_solvation / ExactOccludedHbondSolEnergy.cc	DOF_ID.hh
geometric_solvation / ExactOccludedHbondSolEnergy.cc	DOF_ID_Map.fwd.hh
elec / FA_ElecEnergyAroAll.cc	AtomID.hh
elec / FA_ElecEnergyAroAro.cc	AtomID.hh
methods / Fa_MbenvEnergy.cc	AtomID.hh
methods / Fa_MbsolvEnergy.cc	AtomID.hh
constraints / FabConstraint.cc	AtomID.hh
constraints / FabConstraint.hh	SequenceMapping.fwd.hh
facts / FACTSEnergy.cc	AtomID.fwd.hh
facts / FACTSEnergy.cc	AtomID.hh
facts / FACTSEnergy.hh	AtomID.fwd.hh
facts / FACTSPotential.cc	AtomID.hh
facts / FACTSPotential.cc	AtomID_Map.hh
facts / FACTSPotential.hh	AtomID.fwd.hh
facts / FACTSResidue.cc	AtomID.hh
facts / FACTSResidue.cc	AtomID_Map.hh
saxs / FastSAXSEnergy.cc	AtomID.hh
func / FourPointsFunc.cc	AtomID.hh
methods / FreeMoietyEnergy.hh	DOF_ID.fwd.hh
disulfides / FullatomDisulfideEnergy.hh	TorsionID.fwd.hh
methods / GaussianOverlapEnergy.cc	AtomID.hh
methods / GenBornEnergy.hh	AtomID.fwd.hh
GenBornPotential.cc	AtomID.hh
GenBornPotential.hh	AtomID.fwd.hh
geometric_solvation / GeometricSolEnergyEvaluator.cc	AtomID.hh
geometric_solvation / GeometricSolEnergyEvaluator.cc	types.hh
geometric_solvation / GeometricSolEnergyEvaluator.hh	AtomID.fwd.hh
hackaro / HackAroEnergy.cc	AtomID.hh
hbonds / HBondEnergy.cc	types.hh
hbonds / HBondSet.cc	AtomID.hh
hbonds / HBondSet.hh	AtomID.fwd.hh
packing / HolesEnergy.cc	CacheableAtomID_MapVector.hh
packing / HolesEnergyRes.cc	CacheableAtomID_MapVector.hh
methods / HybridVDW_Energy.cc	AtomID.hh
constraints / KofNConstraint.cc	AtomID.fwd.hh
constraints / KofNConstraint.cc	AtomID.hh
constraints / KofNConstraint.cc	SequenceMapping.fwd.hh
constraints / KofNConstraint.hh	AtomID.hh
packstat / LeeRichards.hh	AtomID.hh
packstat / LeeRichards.hh	AtomID_Map.hh
sasa / LeGrandSasa.cc	AtomID.hh
sasa / LeGrandSasa.cc	AtomID_Map.hh
sasa / LeGrandSasa.hh	AtomID_Map.fwd.hh
methods / LK_PolarNonPolarEnergy.cc	AtomID.hh
constraints / LocalCoordinateConstraint.cc	AtomID.hh
constraints / LocalCoordinateConstraint.cc	NamedStubID.hh
constraints / LocalCoordinateConstraint.cc	SequenceMapping.hh
constraints / LocalCoordinateConstraint.hh	AtomID.hh
loop_graph / LoopCloseEnergy.cc	AtomID.hh
loop_graph / LoopCloseEnergy.hh	AtomID.hh
loop_graph / LoopGraph.hh	AtomID.hh
loop_graph / LoopScoreInfo.cc	AtomID.fwd.hh
loop_graph / LoopScoreInfo.hh	AtomID.hh
methods / MembraneEnvSmoothEnergy.cc	AtomID.hh
MinimizationGraph.hh	DOF_ID.fwd.hh
MinimizationGraph.hh	TorsionID.fwd.hh
methods / MMBondAngleEnergy.cc	AtomID.hh
mm / MMBondAngleResidueTypeParamSet.hh	AtomID.fwd.hh
methods / MMBondLengthEnergy.cc	AtomID.hh
methods / MMTorsionEnergy.cc	AtomID.hh
constraints / MultiConstraint.cc	SequenceMapping.hh
constraints / MultiConstraint.hh	AtomID.hh
constraints / NamedAtomPairConstraint.cc	AtomID.hh
constraints / NamedAtomPairConstraint.cc	Exceptions.hh
constraints / NamedAtomPairConstraint.cc	NamedAtomID.hh
constraints / NamedAtomPairConstraint.cc	SequenceMapping.hh
constraints / NamedAtomPairConstraint.cc	types.hh
constraints / NamedAtomPairConstraint.hh	AtomID.hh
constraints / NamedAtomPairConstraint.hh	NamedAtomID.hh
NeighborList.hh	AtomID.hh
NeighborList.tmpl.hh	AtomID.fwd.hh
NeighborList.tmpl.hh	AtomID.hh
NeighborList.tmpl.hh	AtomID_Map.fwd.hh
NeighborList.tmpl.hh	AtomID_Map.hh
NeighborList.tmpl.hh	AtomID_Mask.fwd.hh
NeighborList.tmpl.hh	DOF_ID.fwd.hh
NeighborList.tmpl.hh	DOF_ID.hh
NeighborList.tmpl.hh	DOF_ID_Map.fwd.hh
NeighborList.tmpl.hh	DOF_ID_Map.hh
NeighborList.tmpl.hh	DOF_ID_Mask.fwd.hh
NeighborList.tmpl.hh	NamedAtomID.fwd.hh
NeighborList.tmpl.hh	NamedAtomID.hh
NeighborList.tmpl.hh	NamedStubID.fwd.hh
NeighborList.tmpl.hh	SequenceMapping.fwd.hh
NeighborList.tmpl.hh	TorsionID.fwd.hh
NeighborList.tmpl.hh	types.hh
methods / NMerPSSMEnergy.hh	DOF_ID.fwd.hh
methods / NMerPSSMEnergy.hh	TorsionID.fwd.hh
methods / NMerRefEnergy.hh	DOF_ID.fwd.hh
methods / NMerRefEnergy.hh	TorsionID.fwd.hh
methods / NMerSVMEnergy.hh	DOF_ID.fwd.hh
methods / NMerSVMEnergy.hh	TorsionID.fwd.hh
constraints / NonResidueTypeConstraint.cc	SequenceMapping.hh
constraints / NonResidueTypeConstraint.hh	AtomID.hh
methods / OmegaTetherEnergy.cc	TorsionID.hh
methods / OmegaTetherEnergy.hh	DOF_ID.fwd.hh
methods / OneBodyEnergy.hh	DOF_ID.fwd.hh
methods / OneBodyEnergy.hh	TorsionID.fwd.hh
orbitals / OrbitalsScore.cc	AtomID.hh
orbitals / OrbitalsScore.cc	types.hh
orbitals / OrbitalsScore.hh	AtomID.fwd.hh
P_AA.cc	TorsionID.hh
P_AA.hh	TorsionID.fwd.hh
methods / P_AA_Energy.hh	DOF_ID.fwd.hh
methods / P_AA_Energy.hh	TorsionID.fwd.hh
methods / P_AA_pp_Energy.cc	TorsionID.hh
methods / P_AA_pp_Energy.hh	DOF_ID.fwd.hh
methods / PeptideBondEnergy.hh	AtomID.fwd.hh
methods / pHEnergy.hh	DOF_ID.fwd.hh
methods / pHEnergy.hh	TorsionID.fwd.hh
packing / PoseBalls.hh	AtomID.hh
packing / PoseBalls.hh	AtomID_Map.hh
packing / PoseBalls.hh	AtomID_Mask.fwd.hh
packing / PoseBallsLite.hh	AtomID.hh
packing / PoseBallsLite.hh	AtomID_Map.hh
packing / PoseBallsLite.hh	AtomID_Mask.fwd.hh
methods / Rama2BOffsetEnergy.cc	DOF_ID.hh
methods / Rama2BOffsetEnergy.cc	TorsionID.hh
methods / RamachandranEnergy.cc	TorsionID.hh
methods / RamachandranEnergy.hh	DOF_ID.fwd.hh
methods / RamachandranEnergy2B.cc	TorsionID.hh
methods / RamachandranEnergy2B.hh	DOF_ID.fwd.hh
methods / ReferenceEnergy.hh	DOF_ID.fwd.hh
methods / ReferenceEnergy.hh	TorsionID.fwd.hh
methods / ReferenceEnergyNoncanonical.hh	DOF_ID.fwd.hh
methods / ReferenceEnergyNoncanonical.hh	TorsionID.fwd.hh
methods / ResidualDipolarCouplingEnergy.hh	AtomID_Map.hh
methods / ResidualDipolarCouplingEnergyRigidSegments.cc	NamedAtomID.hh
methods / ResidualDipolarCouplingEnergyRigidSegments.hh	AtomID_Map.hh
constraints / ResidueTypeConstraint.cc	SequenceMapping.hh
constraints / ResidueTypeConstraint.hh	AtomID.hh
constraints / ResidueTypeLinkingConstraint.hh	AtomID.hh
methods / RG_Energy_Fast.cc	AtomID.hh
rna / RG_Energy_RNA.cc	AtomID.hh
methods / RG_LocalEnergy.cc	AtomID.hh
rms_util.cc	AtomID.hh
rms_util.cc	AtomID_Map.hh
rms_util.cc	types.hh
rms_util.hh	AtomID.fwd.hh
rms_util.hh	AtomID_Map.fwd.hh
rms_util.tmpl.hh	AtomID.fwd.hh
rms_util.tmpl.hh	AtomID.hh
rms_util.tmpl.hh	AtomID_Map.fwd.hh
rms_util.tmpl.hh	AtomID_Map.hh
rms_util.tmpl.hh	AtomID_Mask.fwd.hh
rms_util.tmpl.hh	DOF_ID.fwd.hh
rms_util.tmpl.hh	DOF_ID.hh
rms_util.tmpl.hh	DOF_ID_Map.fwd.hh
rms_util.tmpl.hh	DOF_ID_Mask.fwd.hh
rms_util.tmpl.hh	NamedAtomID.fwd.hh
rms_util.tmpl.hh	NamedAtomID.hh
rms_util.tmpl.hh	NamedStubID.fwd.hh
rms_util.tmpl.hh	SequenceMapping.hh
rms_util.tmpl.hh	TorsionID.fwd.hh
rms_util.tmpl.hh	types.hh
rna / RNA_BulgeEnergy.hh	DOF_ID.fwd.hh
rna / chemical_shift / RNA_ChemicalShiftEnergy.cc	AtomID.hh
rna / chemical_shift / RNA_ChemicalShiftPotential.cc	AtomID.hh
rna / chemical_shift / RNA_CS_MagneticAnisotropy.hh	AtomID.fwd.hh
rna / chemical_shift / RNA_CS_Parameters.hh	AtomID.fwd.hh
rna / chemical_shift / RNA_CS_RingCurrent.hh	AtomID.fwd.hh
rna / chemical_shift / RNA_CS_Util.hh	AtomID.fwd.hh
rna / RNA_DataBackboneEnergy.cc	AtomID.hh
elec / RNA_FA_ElecEnergy.cc	AtomID.hh
rna / RNA_FullAtomStackingEnergy.cc	AtomID.hh
rna / RNA_FullAtomVDW_BasePhosphate.hh	DOF_ID.fwd.hh
rna / RNA_LJ_BaseEnergy.cc	AtomID.hh
rna / RNA_LowResolutionPotential.cc	AtomID.hh
rna / RNA_LowResolutionPotential.hh	AtomID.fwd.hh
rna / RNA_Mg_Energy.cc	AtomID.hh
rna / RNA_SugarCloseEnergy.hh	DOF_ID.fwd.hh
rna / RNA_TorsionPotential.cc	DOF_ID_Mask.fwd.hh
rna / RNA_TorsionPotential.cc	TorsionID.hh
rna / RNA_TorsionPotential.hh	AtomID.fwd.hh
rna / RNA_TorsionPotential.hh	TorsionID.fwd.hh
rna / RNA_VDW_Energy.cc	AtomID.hh
sasa.cc	AtomID.hh
sasa.cc	AtomID_Map.hh
sasa.hh	AtomID_Map.fwd.hh
sasa / SasaMethod.hh	AtomID_Map.hh
saxs / SAXSEnergyFA.hh	AtomID.fwd.hh
ScoreFunction.cc	DOF_ID.hh
ScoreFunction.cc	TorsionID.hh
ScoreFunction.hh	AtomID.fwd.hh
ScoreFunction.hh	DOF_ID.fwd.hh
ScoreFunction.hh	TorsionID.fwd.hh
methods / SequenceDependentRefEnergy.hh	DOF_ID.fwd.hh
methods / SequenceDependentRefEnergy.hh	TorsionID.fwd.hh
constraints / SequenceProfileConstraint.cc	SequenceMapping.hh
constraints / SequenceProfileConstraint.hh	AtomID.hh
constraints / SiteConstraint.cc	AtomID.hh
constraints / SiteConstraint.hh	SequenceMapping.fwd.hh
constraints / SiteConstraintResidues.cc	AtomID.hh
constraints / SiteConstraintResidues.hh	SequenceMapping.fwd.hh
rna / StackElecEnergy.cc	AtomID.hh
methods / SuckerEnergy.cc	AtomID.hh
packing / surf_vol.hh	AtomID_Map.hh
packing / surf_vol.hh	AtomID_Mask.fwd.hh
packing / SurfEnergy.cc	CacheableAtomID_MapVector.hh
packing / SurfVolEnergy.cc	CacheableAtomID_MapVector.hh
symmetry / SymmetricEnergies.cc	AtomID.hh
methods / SymmetricLigandEnergy.cc	AtomID.hh
symmetry / SymmetricScoreFunction.cc	TorsionID.hh
methods / TwoBodyEnergy.hh	AtomID.fwd.hh
methods / TwoBodyEnergy.hh	DOF_ID.fwd.hh
methods / TwoBodyEnergy.hh	TorsionID.fwd.hh
packstat / types.hh	AtomID.hh
methods / UnfoldedStateEnergy.hh	DOF_ID.fwd.hh
methods / UnfoldedStateEnergy.hh	TorsionID.fwd.hh
sasa / util.cc	AtomID.hh
methods / util.cc	AtomID.hh
dssp / util.cc	AtomID.hh
sasa / util.cc	AtomID_Map.hh
methods / util.hh	AtomID.fwd.hh
sasa / util.hh	AtomID_Map.fwd.hh
vdwaals / VDW_Energy.cc	AtomID.hh
methods / WaterAdductIntraEnergy.hh	DOF_ID.fwd.hh
methods / WaterAdductIntraEnergy.hh	TorsionID.fwd.hh
cryst / XtalMLEnergy.cc	AtomID.hh
cryst / XtalMLEnergy.cc	NamedAtomID.hh
func / XYZ_Func.cc	AtomID.hh
func / XYZ_Func.hh	AtomID.fwd.hh
methods / YHHPlanarityEnergy.cc	TorsionID.hh
methods / YHHPlanarityEnergy.hh	DOF_ID.fwd.hh