- a -

• ABS : ShapeComplementarityCalculator_Private.hh

- c -

• CUTOFF : CartesianBondedEnergy.cc

- d -

• DEFAULT_DIST_CUTOFF_MULTIPLIER : metalloproteins_util.hh
• DIST_TH : GaussianOverlapEnergy.cc , SuckerEnergy.cc

- f -

• foreach : metalloproteins_util.cc

- i -

• INCLUDE_core_scoring_MembranePotential_cc : MembranePotential.cc
• INCLUDED_core_conformation_membrane_definitions_util_cc : definitions_util.cc
• INCLUDED_core_conformation_membrane_LipidAccInfo_cc : LipidAccInfo.cc
• INCLUDED_core_conformation_membrane_MembraneInfo_cc : MembraneInfo.cc
• INCLUDED_core_conformation_membrane_SpanningTopology_cc : SpanningTopology.cc
• INCLUDED_core_membrane_config_MembraneProtocolConfigLib_cc : MembraneProtocolConfigLib.cc
• INCLUDED_core_membrane_geometry_EmbeddingFactory_cc : EmbeddingFactory.cc
• INCLUDED_core_membrane_geometry_MembraneResidueFactory_cc : MembraneResidueFactory.cc
• INCLUDED_core_membrane_geometry_util_cc : util.cc
• INCLUDED_core_membrane_io_EmbedDefFallbackConfiguration_cc : EmbedDefFallbackConfiguration.cc
• INCLUDED_core_membrane_io_EmbedDefIO_cc : EmbedDefIO.cc
• INCLUDED_core_membrane_io_EmbedDefLoader_cc : EmbedDefLoader.cc
• INCLUDED_core_membrane_io_EmbedDefOptions_cc : EmbedDefOptions.cc
• INCLUDED_core_membrane_io_EmbedSearchParamsFallbackConfiguration_cc : EmbedSearchParamsFallbackConfiguration.cc
• INCLUDED_core_membrane_io_EmbedSearchParamsIO_cc : EmbedSearchParamsIO.cc
• INCLUDED_core_membrane_io_EmbedSearchParamsLoader_cc : EmbedSearchParamsLoader.cc
• INCLUDED_core_membrane_io_EmbedSearchParamsOptions_cc : EmbedSearchParamsOptions.cc
• INCLUDED_core_membrane_io_LipoFileFallbackConfiguration_cc : LipoFileFallbackConfiguration.cc
• INCLUDED_core_membrane_io_LipoFileIO_cc : LipoFileIO.cc
• INCLUDED_core_membrane_io_LipoFileLoader_cc : LipoFileLoader.cc
• INCLUDED_core_membrane_io_LipoFileOpitons_cc : LipoFileOptions.cc
• INCLUDED_core_membrane_io_SpanFileFallbackConfiguration_cc : SpanFileFallbackConfiguration.cc
• INCLUDED_core_membrane_io_SpanFileIO_cc : SpanFileIO.cc
• INCLUDED_core_membrane_io_SpanFileLoader_cc : SpanFileLoader.cc
• INCLUDED_core_membrane_io_SpanFileOptions_cc : SpanFileOptions.cc
• INCLUDED_core_membrane_MembraneProteinFactory_cc : MembraneProteinFactory.cc
• INCLUDED_core_pack_packer_trie_trie_vs_trie_HH : trie_vs_path.cc
• INCLUDED_core_pose_stream_util_HH : util.cc
• INCLUDED_core_scoring_sc_MolecularSurfaceCalculator_cc : MolecularSurfaceCalculator.cc
• INCLUDED_core_scoring_sc_ShapeComplementarityCalculator_cc : ShapeComplementarityCalculator.cc

- m -

• Math_PI : FACTSResidue.cc
• MAX : ShapeComplementarityCalculator_Private.hh
• MAX_SUBDIV : ShapeComplementarityCalculator_Private.hh
• MIN : ShapeComplementarityCalculator_Private.hh

- p -

• PI : ShapeComplementarityCalculator_Private.hh

- r -

• ROTATE : ResidualDipolarCoupling.cc

- s -

• SQRT_2PI : USOGFunc.cc

- t -

• THROW_EXCEPTION : serialize_pose.cc

- u -

• UPPER_MULTIPLE : ShapeComplementarityCalculator.cc

- x -

• XX : ResidualDipolarCoupling.cc

- y -

• YY : ResidualDipolarCoupling.cc

- z -

• ZZ : ResidualDipolarCoupling.cc