- d -

• D2H_SA_EnergyCreator_registrator : core::init
• DDPscoreCreator_registrator : core::init
• debug : core::pack::interaction_graph
• debug_inaccurateG : core::optimization::symmetry
• DEFAULT_ATOM_TYPE_ : core::chemical::sdf
• DEFAULT_MM_ATOM_TYPE_ : core::chemical::sdf
• default_stub : core::kinematics
• DEPROTONATED : core::chemical
• DFIRE_EnergyCreator_registrator : core::init
• DihedralConstraintCreator_registrator : core::init
• DihedralPairConstraintCreator_registrator : core::init
• DIIODINATION : core::chemical
• DIMETHYLATION : core::chemical
• DipolarCouplingEnergyCreator_registrator : core::init
• dir_jump : core::kinematics
• DirectReadoutEnergyCreator_registrator : core::init
• DisallowIfNonnativeCreator_registrator : core::init
• DisallowIfNonnativeRLTCreator_registrator : core::init
• DistanceChainbreakEnergyCreator_registrator : core::init
• DISULFIDE : core::chemical
• DisulfideMatchingEnergyCreator_registrator : core::init
• DNA_BaseEnergyCreator_registrator : core::init
• DNA_INT_WTS : core::scoring
• DNA_INT_WTS_GB : core::scoring
• DNAChiEnergyCreator_registrator : core::init
• DNATorsionEnergyCreator_registrator : core::init
• DOCK_LOW_PATCH : core::scoring
• DOCK_PATCH : core::scoring
• DUMMY_BOOL : core::scoring::hbonds
• DUMMY_DERIV : core::scoring::hbonds
• dummy_deriv_vector_ : core::scoring::geometric_solvation
• DUMMY_DERIVS : core::scoring::hbonds
• DUMMY_HBGEODIMTYPE : core::scoring::hbonds
• dummy_nodeop : core::pack::scmin
• DUMMY_VECTOR : core::scoring::carbon_hbonds
• DUNBRACK_MAX_BBTOR : core::pack::dunbrack
• DUNBRACK_MAX_SCTOR : core::pack::dunbrack
• DunbrackConstraintCreator_registrator : core::init
• DunbrackEnergyCreator_registrator : core::init