| apply(Pose &pose) | protocols::abinitio::abscript::FragmentCM | virtual |
| protocols::environment::ClaimingMover::apply(core::io::serialization::PipeMap &pmap) | protocols::moves::Mover | virtual |
| broking_finished(EnvClaimBroker::BrokerResult const &) | protocols::environment::ClaimingMover | inlineprotectedvirtual |
| build_claims(jumping::JumpSample const &) | protocols::abinitio::abscript::FragmentJumpCM | protected |
| calculate_jump_sample() const | protocols::abinitio::abscript::FragmentJumpCM | protected |
| ClaimingMover() | protocols::environment::ClaimingMover | |
| ClaimingMover(ClaimingMover const &) | protocols::environment::ClaimingMover | |
| clear_info() | protocols::moves::Mover | inlinevirtual |
| clone() const | protocols::abinitio::abscript::FragmentJumpCM | virtual |
| create() | protocols::moves::Mover | virtual |
| EnvClaims typedef | protocols::abinitio::abscript::FragmentJumpCM | private |
| Filters_map typedef | protocols::moves::Mover | |
| FragmentCM() | protocols::abinitio::abscript::FragmentCM | |
| FragmentCM(simple_moves::FragmentMoverOP, std::string const &) | protocols::abinitio::abscript::FragmentCM | |
| FragmentJumpCM() | protocols::abinitio::abscript::FragmentJumpCM | |
| FragmentJumpCM(std::string const &topol_filename, std::string const &label, std::string const &moverkey) | protocols::abinitio::abscript::FragmentJumpCM | |
| fresh_instance() const | protocols::abinitio::abscript::FragmentJumpCM | virtual |
| get_additional_output() | protocols::moves::Mover | virtual |
| get_current_job() const | protocols::moves::Mover | |
| get_current_tag() const | protocols::moves::Mover | inline |
| get_input_pose() const | protocols::moves::Mover | |
| get_last_move_status() const | protocols::moves::Mover | |
| get_name() const | protocols::abinitio::abscript::FragmentJumpCM | virtual |
| get_native_pose() const | protocols::moves::Mover | |
| get_type() const | protocols::moves::Mover | inline |
| has_passport() const | protocols::environment::ClaimingMover | inlineprotected |
| info() | protocols::moves::Mover | inlinevirtual |
| info() const | protocols::moves::Mover | inlinevirtual |
| initialize(Pose &pose) | protocols::abinitio::abscript::FragmentCM | virtual |
| is_loop_closer() const | protocols::environment::ClaimingMover | inlinevirtual |
| jump_def_ | protocols::abinitio::abscript::FragmentJumpCM | private |
| label() const | protocols::abinitio::abscript::FragmentCM | inline |
| last_proposal_density_ratio() | protocols::moves::Mover | inlinevirtual |
| Mover() | protocols::moves::Mover | |
| Mover(std::string const &type_name) | protocols::moves::Mover | |
| Mover(Mover const &other) | protocols::moves::Mover | |
| mover() const | protocols::abinitio::abscript::FragmentCM | inlineprotected |
| moverkey() | protocols::abinitio::abscript::FragmentJumpCM | inline |
| moverkey_ | protocols::abinitio::abscript::FragmentJumpCM | private |
| name() | protocols::moves::Mover | inlinestatic |
| operator=(Mover const &other) | protocols::moves::Mover | |
| Parent typedef | protocols::abinitio::abscript::FragmentJumpCM | private |
| parse_def(utility::lua::LuaObject const &def, utility::lua::LuaObject const &score_fxns, utility::lua::LuaObject const &tasks, MoverCacheSP cache) | protocols::moves::Mover | virtual |
| parse_my_tag(utility::tag::TagCOP tag, basic::datacache::DataMap &data, protocols::filters::Filters_map const &filters, protocols::moves::Movers_map const &movers, core::pose::Pose const &pose) | protocols::abinitio::abscript::FragmentJumpCM | virtual |
| parse_state(SerializableState const &state) | protocols::moves::Mover | virtual |
| passport() const | protocols::environment::ClaimingMover | protected |
| passport_updated() | protocols::abinitio::abscript::FragmentCM | protectedvirtual |
| Pose typedef | protocols::moves::Mover | |
| PoseCOP typedef | protocols::moves::Mover | |
| register_options() | protocols::moves::Mover | inlinestatic |
| reinitialize_for_each_job() const | protocols::moves::Mover | virtual |
| reinitialize_for_new_input() const | protocols::moves::Mover | virtual |
| reset_status() | protocols::moves::Mover | |
| save_state(SerializableState &state) | protocols::moves::Mover | virtual |
| set_current_job(protocols::jobdist::BasicJobCOP job) | protocols::moves::Mover | |
| set_current_tag(std::string const &new_tag) | protocols::moves::Mover | inline |
| set_input_pose(PoseCOP pose) | protocols::moves::Mover | virtual |
| set_label(std::string const &label) | protocols::abinitio::abscript::FragmentCM | virtual |
| set_last_move_status(MoverStatus status) | protocols::moves::Mover | protected |
| set_mover(simple_moves::FragmentMoverOP mover) | protocols::abinitio::abscript::FragmentCM | virtual |
| set_moverkey(std::string const &key) | protocols::abinitio::abscript::FragmentJumpCM | inline |
| set_native_pose(PoseCOP pose) | protocols::moves::Mover | virtual |
| set_topology(std::string const &topology_file) | protocols::abinitio::abscript::FragmentJumpCM | |
| set_topology(std::string const &ss_info_file, std::string const &pairing_file, core::Size const &n_sheets, bool bRandomSheets) | protocols::abinitio::abscript::FragmentJumpCM | |
| setup_fragments() | protocols::abinitio::abscript::FragmentJumpCM | protected |
| show(std::ostream &output=std::cout) const | protocols::moves::Mover | virtual |
| Strings typedef | protocols::moves::Mover | |
| TagCOP typedef | protocols::moves::Mover | |
| test_move(Pose &pose) | protocols::moves::Mover | inlinevirtual |
| type() const | protocols::moves::Mover | inline |
| type(const std::string &type_in) | protocols::moves::Mover | inline |
| yield_claims(core::pose::Pose &) | protocols::abinitio::abscript::FragmentJumpCM | virtual |
| yield_submovers(std::set< ClaimingMoverOP > &) const | protocols::environment::ClaimingMover | inlinevirtual |
| ~ClaimingMover() | protocols::environment::ClaimingMover | virtual |
| ~FragmentCM() | protocols::abinitio::abscript::FragmentCM | virtual |
| ~FragmentJumpCM() | protocols::abinitio::abscript::FragmentJumpCM | inlinevirtual |
| ~Mover() | protocols::moves::Mover | virtual |
1.8.7