protocols::canonical_sampling::mc_convergence_checks::MPIBPool_RMSD Member List

This is the complete list of members for protocols::canonical_sampling::mc_convergence_checks::MPIBPool_RMSD, including all inherited members.

add(core::io::silent::SilentStruct const &, std::string new_tag="keep_silent_tag")	protocols::canonical_sampling::mc_convergence_checks::Pool_RMSD
add(core::pose::Pose const &, std::string new_tag)	protocols::canonical_sampling::mc_convergence_checks::Pool_RMSD
add(ObjexxFCL::FArray2D_double const &, core::Size nres, std::string new_tag)	protocols::canonical_sampling::mc_convergence_checks::Pool_RMSD
add_pose_to_pool()	protocols::canonical_sampling::mc_convergence_checks::MPIBPool_RMSD
array_to_farray(core::Size index)	protocols::canonical_sampling::mc_convergence_checks::MPIBPool_RMSD
array_to_farray(core::Size index, core::Size num_to_add)	protocols::canonical_sampling::mc_convergence_checks::MPIBPool_RMSD
assign_tag(std::string &new_tag, core::Size optional_id_num)	protocols::canonical_sampling::mc_convergence_checks::MPIBPool_RMSD	private
broadcast_coords(FArray2D_double &coords)	protocols::canonical_sampling::mc_convergence_checks::MPIBPool_RMSD	private
broadcast_newest_coords(int num_to_send)	protocols::canonical_sampling::mc_convergence_checks::MPIBPool_RMSD	private
clear()	protocols::canonical_sampling::mc_convergence_checks::Pool_RMSD
coords() const	protocols::canonical_sampling::mc_convergence_checks::Pool_RMSD	inlineprotected
create_comm(int ranks_to_include[], int new_size)	protocols::canonical_sampling::mc_convergence_checks::MPIBPool_RMSD
evaluate(core::pose::Pose const &, std::string &best_decoy, core::Real &best_rmsd) const	protocols::canonical_sampling::mc_convergence_checks::Pool_RMSD
evaluate(core::io::silent::SilentStruct const &, std::string &best_decoy, core::Real &best_rmsd) const	protocols::canonical_sampling::mc_convergence_checks::Pool_RMSD
evaluate(ObjexxFCL::FArray2D_double &, std::string &best_decoy, core::Real &best_rmsd) const	protocols::canonical_sampling::mc_convergence_checks::Pool_RMSD
evaluate(ObjexxFCL::FArray2D_double &, std::string &best_decoy, core::Real &best_rmsd, core::Size index) const	protocols::canonical_sampling::mc_convergence_checks::Pool_RMSD
evaluate_and_add(core::pose::Pose const &pose, std::string &best_decoy, core::Real &best_rmsd, core::Real transition_threshold)	protocols::canonical_sampling::mc_convergence_checks::MPIBPool_RMSD	virtual
protocols::canonical_sampling::mc_convergence_checks::Pool_RMSD::evaluate_and_add(ObjexxFCL::FArray2D_double &coords, std::string &best_decoy, core::Real &best_rmsd, core::Real transition_threshold)	protocols::canonical_sampling::mc_convergence_checks::Pool_RMSD
farray_to_array(core::Size index)	protocols::canonical_sampling::mc_convergence_checks::MPIBPool_RMSD
farray_to_array(core::Size index, core::Size num_to_add)	protocols::canonical_sampling::mc_convergence_checks::MPIBPool_RMSD
finalize()	protocols::canonical_sampling::mc_convergence_checks::MPIBPool_RMSD	virtual
get(core::Size index, ObjexxFCL::FArray2D_double &result)	protocols::canonical_sampling::mc_convergence_checks::Pool_RMSD
get_discovered_out()	protocols::canonical_sampling::mc_convergence_checks::MPIBPool_RMSD
get_nresidues()	protocols::canonical_sampling::mc_convergence_checks::MPIBPool_RMSD
get_tag(core::Size index)	protocols::canonical_sampling::mc_convergence_checks::Pool_RMSD
increment_pool_size(core::Size new_structures)	protocols::canonical_sampling::mc_convergence_checks::MPIBPool_RMSD	private
initialize()	protocols::canonical_sampling::mc_convergence_checks::MPIBPool_RMSD	private
is_active_node()	protocols::canonical_sampling::mc_convergence_checks::MPIBPool_RMSD
is_master_node()	protocols::canonical_sampling::mc_convergence_checks::MPIBPool_RMSD
master_gather_new_coords()	protocols::canonical_sampling::mc_convergence_checks::MPIBPool_RMSD	private
master_go()	protocols::canonical_sampling::mc_convergence_checks::MPIBPool_RMSD
master_node_	protocols::canonical_sampling::mc_convergence_checks::MPIBPool_RMSD	static
MPIBPool_RMSD(std::string const &silent_file)	protocols::canonical_sampling::mc_convergence_checks::MPIBPool_RMSD
natom() const	protocols::canonical_sampling::mc_convergence_checks::Pool_RMSD	inlineprotected
new_decoys_out_	protocols::canonical_sampling::mc_convergence_checks::MPIBPool_RMSD	private
new_structures_	protocols::canonical_sampling::mc_convergence_checks::MPIBPool_RMSD	private
nodes_finished_	protocols::canonical_sampling::mc_convergence_checks::MPIBPool_RMSD	private
npes_	protocols::canonical_sampling::mc_convergence_checks::MPIBPool_RMSD	private
partition_into_coordinates(double const received_array[], int const size_per_coord[], core::Size num_received, utility::vector1< FArray2D_double > &coords)	protocols::canonical_sampling::mc_convergence_checks::MPIBPool_RMSD
pool_master_node_	protocols::canonical_sampling::mc_convergence_checks::MPIBPool_RMSD	static
pool_npes_	protocols::canonical_sampling::mc_convergence_checks::MPIBPool_RMSD	private
pool_rank_	protocols::canonical_sampling::mc_convergence_checks::MPIBPool_RMSD	private
Pool_RMSD(std::string silent_file)	protocols::canonical_sampling::mc_convergence_checks::Pool_RMSD	inline
Pool_RMSD()	protocols::canonical_sampling::mc_convergence_checks::Pool_RMSD	inline
pool_size_	protocols::canonical_sampling::mc_convergence_checks::MPIBPool_RMSD	private
pop_back()	protocols::canonical_sampling::mc_convergence_checks::Pool_RMSD
rank_	protocols::canonical_sampling::mc_convergence_checks::MPIBPool_RMSD	private
reformat(core::pose::Pose const &pose, std::string &new_tag)	protocols::canonical_sampling::mc_convergence_checks::MPIBPool_RMSD	private
set_discovered_out(std::string const &newout)	protocols::canonical_sampling::mc_convergence_checks::MPIBPool_RMSD
set_excluded_residues(utility::vector1< core::Size > const &excluded_residues)	protocols::canonical_sampling::mc_convergence_checks::Pool_RMSD
set_nresidues(core::Size nres)	protocols::canonical_sampling::mc_convergence_checks::MPIBPool_RMSD
set_reserve_size(int max_size)	protocols::canonical_sampling::mc_convergence_checks::Pool_RMSD
set_transition_threshold(core::Real threshold)	protocols::canonical_sampling::mc_convergence_checks::MPIBPool_RMSD
size() const	protocols::canonical_sampling::mc_convergence_checks::Pool_RMSD	inline
slave_gather_new_coords()	protocols::canonical_sampling::mc_convergence_checks::MPIBPool_RMSD	private
slave_report_no_new_coords()	protocols::canonical_sampling::mc_convergence_checks::MPIBPool_RMSD	private
tag(core::Size index) const	protocols::canonical_sampling::mc_convergence_checks::Pool_RMSD	inlineprotected
tracer_visible_	protocols::canonical_sampling::mc_convergence_checks::MPIBPool_RMSD	private
transfer_buf_	protocols::canonical_sampling::mc_convergence_checks::MPIBPool_RMSD	private
transition_threshold_	protocols::canonical_sampling::mc_convergence_checks::MPIBPool_RMSD	private
update_ranks(int const active_nodes[], int new_size)	protocols::canonical_sampling::mc_convergence_checks::MPIBPool_RMSD
workers_finished()	protocols::canonical_sampling::mc_convergence_checks::MPIBPool_RMSD
workers_finished_	protocols::canonical_sampling::mc_convergence_checks::MPIBPool_RMSD	private
~Pool_RMSD()	protocols::canonical_sampling::mc_convergence_checks::Pool_RMSD	virtual