| apply(core::pose::Pose &pose) | protocols::docking::DockMCMCycle | virtual |
| protocols::moves::Mover::apply(core::io::serialization::PipeMap &pmap) | protocols::moves::Mover | virtual |
| clear_info() | protocols::moves::Mover | inlinevirtual |
| clone() const | protocols::docking::DockMCMCycle | virtual |
| create() | protocols::moves::Mover | virtual |
| dock_mcm_cycle_ | protocols::docking::DockMCMCycle | private |
| DockMCMCycle() | protocols::docking::DockMCMCycle | |
| DockMCMCycle(core::Size const rb_jump, core::scoring::ScoreFunctionOP scorefxn) | protocols::docking::DockMCMCycle | |
| DockMCMCycle(core::Size const rb_jump, core::scoring::ScoreFunctionOP scorefxn, core::scoring::ScoreFunctionOP scorefxn_pack) | protocols::docking::DockMCMCycle | |
| DockMCMCycle(DockJumps const movable_jumps, core::scoring::ScoreFunctionOP scorefxn, core::scoring::ScoreFunctionOP scorefxn_pack) | protocols::docking::DockMCMCycle | |
| Filters_map typedef | protocols::moves::Mover | |
| fresh_instance() const | protocols::moves::Mover | virtual |
| get_additional_output() | protocols::moves::Mover | virtual |
| get_current_job() const | protocols::moves::Mover | |
| get_current_tag() const | protocols::moves::Mover | inline |
| get_input_pose() const | protocols::moves::Mover | |
| get_last_move_status() const | protocols::moves::Mover | |
| get_mc() | protocols::docking::DockMCMCycle | inline |
| get_name() const | protocols::docking::DockMCMCycle | virtual |
| get_native_pose() const | protocols::moves::Mover | |
| get_type() const | protocols::moves::Mover | inline |
| info() | protocols::moves::Mover | inlinevirtual |
| info() const | protocols::moves::Mover | inlinevirtual |
| init_mc(core::pose::Pose &pose) | protocols::docking::DockMCMCycle | |
| last_proposal_density_ratio() | protocols::moves::Mover | inlinevirtual |
| mc_ | protocols::docking::DockMCMCycle | private |
| min_tolerance_ | protocols::docking::DockMCMCycle | private |
| min_type_ | protocols::docking::DockMCMCycle | private |
| movable_jumps() const | protocols::docking::DockMCMCycle | |
| movable_jumps_ | protocols::docking::DockMCMCycle | private |
| movemap_ | protocols::docking::DockMCMCycle | private |
| Mover() | protocols::moves::Mover | |
| Mover(std::string const &type_name) | protocols::moves::Mover | |
| Mover(Mover const &other) | protocols::moves::Mover | |
| name() | protocols::moves::Mover | inlinestatic |
| nb_list_ | protocols::docking::DockMCMCycle | private |
| norepack1_ | protocols::docking::DockMCMCycle | private |
| norepack2_ | protocols::docking::DockMCMCycle | private |
| operator<<(std::ostream &out, const DockMCMCycle &dp) | protocols::docking::DockMCMCycle | friend |
| operator=(Mover const &other) | protocols::moves::Mover | |
| parse_def(utility::lua::LuaObject const &def, utility::lua::LuaObject const &score_fxns, utility::lua::LuaObject const &tasks, MoverCacheSP cache) | protocols::moves::Mover | virtual |
| parse_my_tag(TagCOP tag, basic::datacache::DataMap &data, Filters_map const &filters, Movers_map const &movers, Pose const &pose) | protocols::moves::Mover | virtual |
| parse_state(SerializableState const &state) | protocols::moves::Mover | virtual |
| Pose typedef | protocols::moves::Mover | |
| PoseCOP typedef | protocols::moves::Mover | |
| Real typedef | protocols::docking::DockMCMCycle | private |
| register_options() | protocols::moves::Mover | inlinestatic |
| reinitialize_for_each_job() const | protocols::moves::Mover | virtual |
| reinitialize_for_new_input() const | protocols::moves::Mover | virtual |
| repack_period_ | protocols::docking::DockMCMCycle | private |
| reset_cycle_index() | protocols::docking::DockMCMCycle | |
| reset_status() | protocols::moves::Mover | |
| rot_magnitude_ | protocols::docking::DockMCMCycle | private |
| rtmin_ | protocols::docking::DockMCMCycle | private |
| save_state(SerializableState &state) | protocols::moves::Mover | virtual |
| scmin_ | protocols::docking::DockMCMCycle | private |
| scorefxn_ | protocols::docking::DockMCMCycle | private |
| scorefxn_pack_ | protocols::docking::DockMCMCycle | private |
| set_current_job(protocols::jobdist::BasicJobCOP job) | protocols::moves::Mover | |
| set_current_tag(std::string const &new_tag) | protocols::moves::Mover | inline |
| set_default() | protocols::docking::DockMCMCycle | |
| set_input_pose(PoseCOP pose) | protocols::moves::Mover | virtual |
| set_last_move_status(MoverStatus status) | protocols::moves::Mover | protected |
| set_min_type(std::string min_type) | protocols::docking::DockMCMCycle | inline |
| set_move_map(core::kinematics::MoveMapOP movemap) | protocols::docking::DockMCMCycle | |
| set_native_pose(PoseCOP pose) | protocols::moves::Mover | virtual |
| set_rot_magnitude(core::Real value) | protocols::docking::DockMCMCycle | inline |
| set_rtmin(bool setting) | protocols::docking::DockMCMCycle | inline |
| set_scmin(bool setting) | protocols::docking::DockMCMCycle | inline |
| set_task_factory(core::pack::task::TaskFactoryCOP tf) | protocols::docking::DockMCMCycle | |
| setup_protocol(core::pose::Pose &pose) | protocols::docking::DockMCMCycle | private |
| show(std::ostream &out=std::cout) const | protocols::docking::DockMCMCycle | virtual |
| Strings typedef | protocols::moves::Mover | |
| TagCOP typedef | protocols::moves::Mover | |
| test_move(Pose &pose) | protocols::moves::Mover | inlinevirtual |
| tf_ | protocols::docking::DockMCMCycle | private |
| trans_magnitude_ | protocols::docking::DockMCMCycle | private |
| type() const | protocols::moves::Mover | inline |
| type(const std::string &type_in) | protocols::moves::Mover | inline |
| ~DockMCMCycle() | protocols::docking::DockMCMCycle | |
| ~Mover() | protocols::moves::Mover | virtual |
1.8.7