protocols::md::MDBase Member List

This is the complete list of members for protocols::md::MDBase, including all inherited members.

acc_	protocols::md::MDBase	protected
apply(core::pose::Pose &pose)=0	protocols::md::MDBase	pure virtual
protocols::moves::Mover::apply(core::io::serialization::PipeMap &pmap)	protocols::moves::Mover	virtual
clear_info()	protocols::moves::Mover	inlinevirtual
clone() const	protocols::moves::Mover	virtual
constrained_	protocols::md::MDBase	protected
context_update_step_	protocols::md::MDBase	protected
create()	protocols::moves::Mover	virtual
cst_on_pose(pose::Pose &pose)	protocols::md::MDBase
cst_sdev_	protocols::md::MDBase	protected
cummulative_time()	protocols::md::MDBase	inline
cummulative_time_	protocols::md::MDBase	protected
dt()	protocols::md::MDBase	inline
dt_	protocols::md::MDBase	protected
Emin_obj_	protocols::md::MDBase	protected
Filters_map typedef	protocols::moves::Mover
fresh_instance() const	protocols::moves::Mover	virtual
get_additional_output()	protocols::moves::Mover	virtual
get_current_job() const	protocols::moves::Mover
get_current_tag() const	protocols::moves::Mover	inline
get_input_pose() const	protocols::moves::Mover
get_last_move_status() const	protocols::moves::Mover
get_name() const =0	protocols::md::MDBase	pure virtual
get_native_pose() const	protocols::moves::Mover
get_type() const	protocols::moves::Mover	inline
info()	protocols::moves::Mover	inlinevirtual
info() const	protocols::moves::Mover	inlinevirtual
kinetic_energy_	protocols::md::MDBase	protected
last_proposal_density_ratio()	protocols::moves::Mover	inlinevirtual
mass_	protocols::md::MDBase	protected
md_report_stepsize_	protocols::md::MDBase	protected
MDBase()	protocols::md::MDBase	inline
mdsch_	protocols::md::MDBase	protected
movemap() const =0	protocols::md::MDBase	pure virtual
movemap_	protocols::md::MDBase	protected
Mover()	protocols::moves::Mover
Mover(std::string const &type_name)	protocols::moves::Mover
Mover(Mover const &other)	protocols::moves::Mover
Multivec typedef	protocols::md::MDBase
n_dof()	protocols::md::MDBase	inline
n_dof_	protocols::md::MDBase	protected
n_dof_temp_	protocols::md::MDBase	protected
name()	protocols::moves::Mover	inlinestatic
ncyc_postmin_	protocols::md::MDBase	protected
ncyc_premin_	protocols::md::MDBase	protected
nstep()	protocols::md::MDBase	inline
nstep_	protocols::md::MDBase	protected
operator=(Mover const &other)	protocols::moves::Mover
parent typedef	protocols::md::MDBase
parse_def(utility::lua::LuaObject const &def, utility::lua::LuaObject const &score_fxns, utility::lua::LuaObject const &tasks, MoverCacheSP cache)	protocols::moves::Mover	virtual
parse_my_tag(TagCOP tag, basic::datacache::DataMap &data, Filters_map const &filters, Movers_map const &movers, Pose const &pose)	protocols::moves::Mover	virtual
parse_schfile(std::string const schfile)	protocols::md::MDBase
parse_state(SerializableState const &state)	protocols::moves::Mover	virtual
Pose typedef	protocols::moves::Mover
pose0_	protocols::md::MDBase	protected
pose_minobj_	protocols::md::MDBase	protected
PoseCOP typedef	protocols::moves::Mover
potential_energy_	protocols::md::MDBase	protected
register_options()	protocols::moves::Mover	inlinestatic
reinitialize_for_each_job() const	protocols::moves::Mover	virtual
reinitialize_for_new_input() const	protocols::moves::Mover	virtual
report_scorecomp_	protocols::md::MDBase	protected
reset_status()	protocols::moves::Mover
save_state(SerializableState &state)	protocols::moves::Mover	virtual
scheduled_	protocols::md::MDBase	protected
scorefxn()	protocols::md::MDBase	inline
scorefxn() const	protocols::md::MDBase	inline
scorefxn_	protocols::md::MDBase	protected
scorefxn_obj_	protocols::md::MDBase	protected
selectmode_	protocols::md::MDBase	protected
set_constraint(Real const sdev)	protocols::md::MDBase
set_context_update_step(Size const value)	protocols::md::MDBase	inline
set_current_job(protocols::jobdist::BasicJobCOP job)	protocols::moves::Mover
set_current_tag(std::string const &new_tag)	protocols::moves::Mover	inline
set_defaults()	protocols::md::MDBase	inline
set_input_pose(PoseCOP pose)	protocols::moves::Mover	virtual
set_last_move_status(MoverStatus status)	protocols::moves::Mover	protected
set_movemap(core::pose::Pose const &pose, core::kinematics::MoveMapCOP movemap)=0	protocols::md::MDBase	pure virtual
set_native_pose(PoseCOP pose)	protocols::moves::Mover	virtual
set_nstep(core::Size const nstep)	protocols::md::MDBase	inline
set_premin(Size const value)	protocols::md::MDBase	inline
set_report_scorecomp(bool const value)	protocols::md::MDBase	inline
set_reportstep(core::Size const nstep)	protocols::md::MDBase	inline
set_scorefxn_obj(core::scoring::ScoreFunctionCOP sfxn)	protocols::md::MDBase	inline
set_selectmode(std::string const selectmode_in)	protocols::md::MDBase	inline
set_store_trj(bool const value)	protocols::md::MDBase	inline
set_temperature(core::Real const temp0)	protocols::md::MDBase	inline
show(std::ostream &output=std::cout) const	protocols::moves::Mover	virtual
store_trj() const	protocols::md::MDBase	inline
store_trj_	protocols::md::MDBase	protected
Strings typedef	protocols::moves::Mover
TagCOP typedef	protocols::moves::Mover
temp0()	protocols::md::MDBase	inline
temp0_	protocols::md::MDBase	protected
temperature_	protocols::md::MDBase	protected
test_move(Pose &pose)	protocols::moves::Mover	inlinevirtual
time_minobj_	protocols::md::MDBase	protected
trj_	protocols::md::MDBase	protected
type() const	protocols::moves::Mover	inline
type(const std::string &type_in)	protocols::moves::Mover	inline
vel_	protocols::md::MDBase	protected
xyz_	protocols::md::MDBase	protected
~MDBase()	protocols::md::MDBase	inline
~Mover()	protocols::moves::Mover	virtual