| add_evaluation(evaluation::PoseEvaluatorOP) | protocols::jd2::JobOutputter | |
| add_output_observer(JobOutputterObserverAP an_observer) | protocols::jd2::JobOutputter | |
| affixed_numbered_name(JobCOP job) | protocols::jd2::JobOutputter | protected |
| call_output_observers(core::pose::Pose const &pose, JobOP job) const | protocols::jd2::JobOutputter | |
| clear_evaluators() | protocols::jd2::JobOutputter | |
| dump_pose(JobCOP job, core::pose::Pose const &pose, utility::io::ozstream &out) | protocols::jd2::PDBJobOutputter | protectedvirtual |
| enz_scofile_ | protocols::enzdes::EnzdesJobOutputter | private |
| EnzdesJobOutputter() | protocols::enzdes::EnzdesJobOutputter | |
| evaluate(core::pose::Pose &pose, std::string tag, core::io::silent::SilentStruct &pss) const | protocols::jd2::JobOutputter | |
| evaluators() const | protocols::jd2::JobOutputter | |
| extended_name(JobCOP job) | protocols::jd2::PDBJobOutputter | protectedvirtual |
| extended_name(JobCOP job, std::string const &suffix) | protocols::jd2::PDBJobOutputter | protected |
| extract_data_from_Job(JobCOP job, utility::io::ozstream &out) | protocols::jd2::PDBJobOutputter | protectedvirtual |
| extract_scores(core::pose::Pose const &pose, utility::io::ozstream &out) | protocols::jd2::PDBJobOutputter | protectedvirtual |
| file(JobCOP job, std::string const &data) | protocols::jd2::FileJobOutputter | virtual |
| FileJobOutputter() | protocols::jd2::FileJobOutputter | |
| filename(JobCOP) const | protocols::jd2::JobOutputter | inlinevirtual |
| final_pose(protocols::jd2::JobOP job, core::pose::Pose const &pose) | protocols::enzdes::EnzdesJobOutputter | virtual |
| flush() | protocols::jd2::JobOutputter | virtual |
| job_has_completed(protocols::jd2::JobOP job) | protocols::enzdes::EnzdesJobOutputter | |
| protocols::jd2::PDBJobOutputter::job_has_completed(JobCOP job) | protocols::jd2::PDBJobOutputter | virtual |
| JobOutputter() | protocols::jd2::JobOutputter | |
| other_pose(JobOP job, core::pose::Pose const &pose, std::string const &tag, int copy_count=-1, bool score_only=false) | protocols::jd2::PDBJobOutputter | virtual |
| output_name(JobCOP job) | protocols::jd2::PDBJobOutputter | virtual |
| parent typedef | protocols::enzdes::EnzdesJobOutputter | |
| PDBJobOutputter() | protocols::jd2::PDBJobOutputter | |
| remove_output_observer(JobOutputterObserverAP old_observer) | protocols::jd2::JobOutputter | |
| scorefile(protocols::jd2::JobCOP job, core::pose::Pose const &pose, std::string tag="", std::string scorefile="") | protocols::enzdes::EnzdesJobOutputter | protectedvirtual |
| scorefile_name() | protocols::jd2::FileJobOutputter | inline |
| scorefile_writer_ | protocols::enzdes::EnzdesJobOutputter | private |
| set_evaluators(evaluation::PoseEvaluators const &) | protocols::jd2::JobOutputter | |
| silent_job_outputter_ | protocols::enzdes::EnzdesJobOutputter | private |
| silent_output_ | protocols::enzdes::EnzdesJobOutputter | private |
| starting_pose(core::pose::Pose const &) | protocols::jd2::JobOutputter | virtual |
| write_scorefile() const | protocols::jd2::FileJobOutputter | inline |
| ~EnzdesJobOutputter() | protocols::enzdes::EnzdesJobOutputter | |
| ~FileJobOutputter() | protocols::jd2::FileJobOutputter | virtual |
| ~JobOutputter() | protocols::jd2::JobOutputter | virtual |
| ~PDBJobOutputter() | protocols::jd2::PDBJobOutputter | virtual |