protocols::stepwise::sampling::protein::StepWiseProteinResidueSampler Member List

This is the complete list of members for protocols::stepwise::sampling::protein::StepWiseProteinResidueSampler, including all inherited members.

apply(core::pose::Pose &pose_to_visualize)	protocols::stepwise::sampling::protein::StepWiseProteinResidueSampler	virtual
protocols::moves::Mover::apply(core::io::serialization::PipeMap &pmap)	protocols::moves::Mover	virtual
clear_info()	protocols::moves::Mover	inlinevirtual
clone() const	protocols::moves::Mover	virtual
close_loops_	protocols::stepwise::sampling::protein::StepWiseProteinResidueSampler	private
close_loops_in_samples(core::pose::Pose &pose, rotamer_sampler::RotamerSizedOP sampler)	protocols::stepwise::sampling::protein::StepWiseProteinResidueSampler	private
create()	protocols::moves::Mover	virtual
do_ccd_	protocols::stepwise::sampling::protein::StepWiseProteinResidueSampler	private
enable_sampling_of_loop_takeoff(core::pose::Pose &pose, rotamer_sampler::RotamerSizedOP sampler)	protocols::stepwise::sampling::protein::StepWiseProteinResidueSampler	private
Filters_map typedef	protocols::moves::Mover
frag_files_	protocols::stepwise::sampling::protein::StepWiseProteinResidueSampler	private
fresh_instance() const	protocols::moves::Mover	virtual
full_optimize() const	protocols::stepwise::sampling::protein::StepWiseProteinResidueSampler	inline
full_optimize_	protocols::stepwise::sampling::protein::StepWiseProteinResidueSampler	private
get_additional_output()	protocols::moves::Mover	virtual
get_basic_sampler(core::pose::Pose &pose)	protocols::stepwise::sampling::protein::StepWiseProteinResidueSampler	private
get_current_job() const	protocols::moves::Mover
get_current_tag() const	protocols::moves::Mover	inline
get_input_pose() const	protocols::moves::Mover
get_last_move_status() const	protocols::moves::Mover
get_name() const	protocols::stepwise::sampling::protein::StepWiseProteinResidueSampler	inlinevirtual
get_native_pose() const	protocols::moves::Mover
get_packer(core::pose::Pose &pose)	protocols::stepwise::sampling::protein::StepWiseProteinResidueSampler	private
get_pose_list()	protocols::stepwise::sampling::protein::StepWiseProteinResidueSampler	inline
get_type() const	protocols::moves::Mover	inline
info()	protocols::moves::Mover	inlinevirtual
info() const	protocols::moves::Mover	inlinevirtual
initialize_sampler(core::pose::Pose &pose)	protocols::stepwise::sampling::protein::StepWiseProteinResidueSampler	private
initialize_screeners(core::pose::Pose &pose)	protocols::stepwise::sampling::protein::StepWiseProteinResidueSampler	private
input_streams_	protocols::stepwise::sampling::protein::StepWiseProteinResidueSampler	private
job_parameters_	protocols::stepwise::sampling::protein::StepWiseProteinResidueSampler	private
last_proposal_density_ratio()	protocols::moves::Mover	inlinevirtual
Mover()	protocols::moves::Mover
Mover(std::string const &type_name)	protocols::moves::Mover
Mover(Mover const &other)	protocols::moves::Mover
moving_res_list() const	protocols::stepwise::sampling::protein::StepWiseProteinResidueSampler	inline
moving_res_list_	protocols::stepwise::sampling::protein::StepWiseProteinResidueSampler	private
name()	protocols::moves::Mover	inlinestatic
operator=(Mover const &other)	protocols::moves::Mover
options_	protocols::stepwise::sampling::protein::StepWiseProteinResidueSampler	private
parse_def(utility::lua::LuaObject const &def, utility::lua::LuaObject const &score_fxns, utility::lua::LuaObject const &tasks, MoverCacheSP cache)	protocols::moves::Mover	virtual
parse_my_tag(TagCOP tag, basic::datacache::DataMap &data, Filters_map const &filters, Movers_map const &movers, Pose const &pose)	protocols::moves::Mover	virtual
parse_state(SerializableState const &state)	protocols::moves::Mover	virtual
Pose typedef	protocols::moves::Mover
pose_list_	protocols::stepwise::sampling::protein::StepWiseProteinResidueSampler	private
pose_selection_	protocols::stepwise::sampling::protein::StepWiseProteinResidueSampler	private
PoseCOP typedef	protocols::moves::Mover
register_options()	protocols::moves::Mover	inlinestatic
reinitialize_for_each_job() const	protocols::moves::Mover	virtual
reinitialize_for_new_input() const	protocols::moves::Mover	virtual
reset_status()	protocols::moves::Mover
sampler_	protocols::stepwise::sampling::protein::StepWiseProteinResidueSampler	private
save_state(SerializableState &state)	protocols::moves::Mover	virtual
scorefxn_	protocols::stepwise::sampling::protein::StepWiseProteinResidueSampler	private
screeners_	protocols::stepwise::sampling::protein::StepWiseProteinResidueSampler	private
screening_pose_	protocols::stepwise::sampling::protein::StepWiseProteinResidueSampler	private
set_current_job(protocols::jobdist::BasicJobCOP job)	protocols::moves::Mover
set_current_tag(std::string const &new_tag)	protocols::moves::Mover	inline
set_do_ccd(bool const setting)	protocols::stepwise::sampling::protein::StepWiseProteinResidueSampler	inline
set_frag_files(utility::vector1< std::string > const &frag_files)	protocols::stepwise::sampling::protein::StepWiseProteinResidueSampler	inline
set_input_pose(PoseCOP pose)	protocols::moves::Mover	virtual
set_input_streams(utility::vector1< InputStreamWithResidueInfoOP > const &input_streams)	protocols::stepwise::sampling::protein::StepWiseProteinResidueSampler	inline
set_last_move_status(MoverStatus status)	protocols::moves::Mover	protected
set_moving_res_list(utility::vector1< Size > const &setting)	protocols::stepwise::sampling::protein::StepWiseProteinResidueSampler	inline
set_native_pose(PoseCOP pose)	protocols::moves::Mover	virtual
set_options(StepWiseProteinModelerOptionsCOP options)	protocols::stepwise::sampling::protein::StepWiseProteinResidueSampler	inline
set_scorefxn(core::scoring::ScoreFunctionOP const &scorefxn)	protocols::stepwise::sampling::protein::StepWiseProteinResidueSampler	inline
show(std::ostream &output=std::cout) const	protocols::moves::Mover	virtual
StepWiseProteinResidueSampler(StepWiseProteinJobParametersCOP &job_parameters)	protocols::stepwise::sampling::protein::StepWiseProteinResidueSampler
Strings typedef	protocols::moves::Mover
TagCOP typedef	protocols::moves::Mover
test_move(Pose &pose)	protocols::moves::Mover	inlinevirtual
type() const	protocols::moves::Mover	inline
type(const std::string &type_in)	protocols::moves::Mover	inline
~Mover()	protocols::moves::Mover	virtual
~StepWiseProteinResidueSampler()	protocols::stepwise::sampling::protein::StepWiseProteinResidueSampler