protocols::features::ProtocolFeatures Class Reference

#include <ProtocolFeatures.hh>

Public Member Functions
	ProtocolFeatures ()
	ProtocolFeatures (ProtocolFeatures const &src)
virtual	~ProtocolFeatures ()
std::string	type_name () const
	return string with class name More...
virtual void	write_schema_to_db (utility::sql_database::sessionOP db_session, core::Size protocol_id) const
	generate the table schemas and write them to the database More...
utility::vector1< std::string >	features_reporter_dependencies () const
	return the set of features reporters that are required to also already be extracted by the time this one is used. More...
std::string	indices () const
	return sql statements that setup helpful indices on the tables More...
core::Size	report_features (core::Size protocol_id, utility::sql_database::sessionOP db_session)
	collect all the feature data for the pose if protocol_id is 0 autoincrement the protocol_id More...

Constructor & Destructor Documentation

protocols::features::ProtocolFeatures::ProtocolFeatures

(

)

protocols::features::ProtocolFeatures::ProtocolFeatures

(

ProtocolFeatures const &

src

)

protocols::features::ProtocolFeatures::~ProtocolFeatures ( )

virtual

Member Function Documentation

utility::vector1< std::string > protocols::features::ProtocolFeatures::features_reporter_dependencies

(

)

const

return the set of features reporters that are required to also already be extracted by the time this one is used.

string protocols::features::ProtocolFeatures::indices

(

)

const

return sql statements that setup helpful indices on the tables

Size protocols::features::ProtocolFeatures::report_features	(	core::Size	protocol_id,
		utility::sql_database::sessionOP	db_session
	)

collect all the feature data for the pose if protocol_id is 0 autoincrement the protocol_id

References utility::options::OptionCollection::get_argv(), minirosetta_svn_url(), minirosetta_svn_version(), option, basic::options::option, protocol, basic::database::safely_prepare_statement(), basic::database::safely_read_from_database(), script, and protocols::features::TR.

string protocols::features::ProtocolFeatures::type_name

(

)

const

return string with class name

void protocols::features::ProtocolFeatures::write_schema_to_db ( utility::sql_database::sessionOP  db_session, core::Size  protocol_id  ) const

virtual

generate the table schemas and write them to the database

References basic::database::schema_generator::Schema::add_column(), and basic::database::schema_generator::Schema::write().

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The documentation for this class was generated from the following files:

• symlinks/rosetta/src/protocols/features/ProtocolFeatures.hh
• symlinks/rosetta/src/protocols/features/ProtocolFeatures.cc