simply take a list of filters and combine them using the operation above More...

#include <OperatorFilter.hh>

Public Member Functions
	Operator ()

virtual	~Operator ()

filters::FilterOP	clone () const

filters::FilterOP	fresh_instance () const

virtual bool	apply (core::pose::Pose const &pose) const
	Returns true if the given pose passes the filter, false otherwise. More...

virtual void	report (std::ostream &out, core::pose::Pose const &pose) const

virtual core::Real	report_sm (core::pose::Pose const &pose) const
	used to report filter internals through a score or silent file More...

void	parse_my_tag (utility::tag::TagCOP tag, basic::datacache::DataMap &, filters::Filters_map const &filters, moves::Movers_map const &, core::pose::Pose const &)

core::Real	compute (core::pose::Pose const &pose) const

utility::vector1 < protocols::filters::FilterOP >	filters () const

void	add_filter (protocols::filters::FilterOP f)

void	reset_baseline (core::pose::Pose const &pose, bool const attempt_read_from_checkpoint)

core::Real	threshold () const
	goes over Sigmoid filters and resets them. Note that this is nonconst, and cannot be called from apply More...

void	threshold (core::Real const t)

Operation	operation () const

void	operation (Operation const o)

void	negate (bool const b)

bool	negate () const

utility::vector1< std::string >	relative_pose_names ()

void	relative_pose_names (utility::vector1< std::string > const s)

bool	multi_relative () const

void	multi_relative (bool const m)

void	modify_relative_filters_pdb_names ()

bool	logarithm () const

void	logarithm (bool const b)

void	report_subvalues (bool const report)

bool	report_subvalues () const

Public Member Functions inherited from protocols::filters::Filter
	Filter ()

	Filter (std::string const &)

	Filter (Filter const &)

virtual	~Filter ()

virtual std::string	get_type () const

std::string	get_user_defined_name () const

void	set_user_defined_name (std::string const &name)

virtual void	clear ()
	used to clear internal variables if needed. Using fresh_instance is preferred since it's a pure virtual More...

virtual void	apply (core::io::serialization::PipeMap &pmap)

virtual void	score (core::io::serialization::PipeMap &pmap)

virtual core::Real	score (core::pose::Pose &pose)

virtual void	parse_def (utility::lua::LuaObject const &def, utility::lua::LuaObject const &score_fxns, utility::lua::LuaObject const &tasks)

virtual std::string	name () const

Private Attributes
utility::vector1 < protocols::filters::FilterOP >	filters_

Operation	operation_

core::Real	threshold_

bool	negate_

utility::vector1< std::string >	relative_pose_names_

bool	multi_relative_

bool	logarithm_

bool	report_subvalues_

Additional Inherited Members
Protected Attributes inherited from protocols::filters::Filter
std::string	scorename_

Detailed Description

simply take a list of filters and combine them using the operation above

Constructor & Destructor Documentation

protocols::simple_filters::Operator::Operator ( )

References filters, and filters_.

Referenced by clone(), and fresh_instance().

protocols::simple_filters::Operator::~Operator ( )

virtual

Member Function Documentation

void protocols::simple_filters::Operator::add_filter ( protocols::filters::FilterOP f )

References filters_.

Referenced by modify_relative_filters_pdb_names(), and parse_my_tag().

bool protocols::simple_filters::Operator::apply ( core::pose::Pose const & pose ) const

virtual

Returns true if the given pose passes the filter, false otherwise.

Implements protocols::filters::Filter.

References compute(), negate(), threshold(), and protocols::simple_filters::TR.

filters::FilterOP protocols::simple_filters::Operator::clone ( ) const

inlinevirtual

Implements protocols::filters::Filter.

References Operator().

core::Real protocols::simple_filters::Operator::compute ( core::pose::Pose const & pose ) const

utility::vector1< protocols::filters::FilterOP > protocols::simple_filters::Operator::filters ( ) const

References filters_.

Referenced by compute(), and reset_baseline().

filters::FilterOP protocols::simple_filters::Operator::fresh_instance ( ) const

inlinevirtual

Implements protocols::filters::Filter.

References Operator().

bool protocols::simple_filters::Operator::logarithm ( ) const

inline

References logarithm_.

Referenced by compute(), and parse_my_tag().

void protocols::simple_filters::Operator::logarithm ( bool const b )

inline

References protocols::match::upstream::b, and logarithm_.

void protocols::simple_filters::Operator::modify_relative_filters_pdb_names ( )

References add_filter(), filter, filters_, protocols::filters::Filter::get_type(), relative_pose_names_, runtime_assert, and protocols::simple_filters::TR.

Referenced by parse_my_tag().

bool protocols::simple_filters::Operator::multi_relative ( ) const

inline

References multi_relative_.

Referenced by parse_my_tag().

void protocols::simple_filters::Operator::multi_relative ( bool const m )

inline

References multi_relative_.

void protocols::simple_filters::Operator::negate ( bool const b )

inline

References protocols::match::upstream::b, and negate_.

bool protocols::simple_filters::Operator::negate ( ) const

inline

References negate_.

Referenced by apply(), compute(), and parse_my_tag().

Operation protocols::simple_filters::Operator::operation ( ) const

inline

References operation_.

Referenced by compute(), and parse_my_tag().

void protocols::simple_filters::Operator::operation ( Operation const o )

inline

References operation_.

void protocols::simple_filters::Operator::parse_my_tag	(	utility::tag::TagCOP	tag,
		basic::datacache::DataMap &	,
		filters::Filters_map const &	filters,
		moves::Movers_map const &	,
		core::pose::Pose const &
	)