| all_ala_C | protocols::seeded_abinitio::GrowPeptides | private |
| all_ala_N | protocols::seeded_abinitio::GrowPeptides | private |
| all_seeds_ | protocols::seeded_abinitio::GrowPeptides | private |
| anchor_specified_ | protocols::seeded_abinitio::GrowPeptides | private |
| anchors_ | protocols::seeded_abinitio::GrowPeptides | private |
| append_residues_cterminally(core::Size seq_register, core::Size res_pos, core::Size stop, std::string &nat_seq, core::pose::Pose &target_seeds) | protocols::seeded_abinitio::GrowPeptides | private |
| append_residues_nterminally(core::Size seq_register, core::Size res_pos, core::Size stop, std::string &nat_seq, core::pose::Pose &target_seeds) | protocols::seeded_abinitio::GrowPeptides | private |
| apply(core::pose::Pose &pose) | protocols::seeded_abinitio::GrowPeptides | virtual |
| protocols::moves::Mover::apply(core::io::serialization::PipeMap &pmap) | protocols::moves::Mover | virtual |
| clear_info() | protocols::moves::Mover | inlinevirtual |
| clone() const | protocols::seeded_abinitio::GrowPeptides | virtual |
| create() | protocols::moves::Mover | virtual |
| csequence_ | protocols::seeded_abinitio::GrowPeptides | private |
| curr_pose_ | protocols::seeded_abinitio::GrowPeptides | private |
| ddg() | protocols::seeded_abinitio::GrowPeptides | |
| ddg_ | protocols::seeded_abinitio::GrowPeptides | private |
| extend_cterm | protocols::seeded_abinitio::GrowPeptides | private |
| extend_nterm | protocols::seeded_abinitio::GrowPeptides | private |
| fetch_foldtree | protocols::seeded_abinitio::GrowPeptides | private |
| Filters_map typedef | protocols::moves::Mover | |
| fresh_instance() const | protocols::seeded_abinitio::GrowPeptides | virtual |
| get_additional_output() | protocols::moves::Mover | virtual |
| get_current_job() const | protocols::moves::Mover | |
| get_current_tag() const | protocols::moves::Mover | inline |
| get_input_pose() const | protocols::moves::Mover | |
| get_last_move_status() const | protocols::moves::Mover | |
| get_name() const | protocols::seeded_abinitio::GrowPeptides | virtual |
| get_native_pose() const | protocols::moves::Mover | |
| get_type() const | protocols::moves::Mover | inline |
| grow_from_seeds(core::pose::Pose curr_pose, std::string sequence, protocols::loops::Loops &seeds, utility::vector1< Size > cutpoints) | protocols::seeded_abinitio::GrowPeptides | private |
| grow_from_verteces(core::pose::Pose &curr_pose, std::string sequence, protocols::loops::Loops &seeds, std::set< core::Size > vertex_set) | protocols::seeded_abinitio::GrowPeptides | private |
| GrowPeptides() | protocols::seeded_abinitio::GrowPeptides | |
| info() | protocols::moves::Mover | inlinevirtual |
| info() const | protocols::moves::Mover | inlinevirtual |
| last_proposal_density_ratio() | protocols::moves::Mover | inlinevirtual |
| Mover() | protocols::moves::Mover | |
| Mover(std::string const &type_name) | protocols::moves::Mover | |
| Mover(Mover const &other) | protocols::moves::Mover | |
| name() | protocols::moves::Mover | inlinestatic |
| nsequence_ | protocols::seeded_abinitio::GrowPeptides | private |
| operator=(Mover const &other) | protocols::moves::Mover | |
| output_centroid | protocols::seeded_abinitio::GrowPeptides | private |
| parse_def(utility::lua::LuaObject const &def, utility::lua::LuaObject const &score_fxns, utility::lua::LuaObject const &tasks, MoverCacheSP cache) | protocols::moves::Mover | virtual |
| parse_my_tag(utility::tag::TagCOP tag, basic::datacache::DataMap &, protocols::filters::Filters_map const &, protocols::moves::Movers_map const &, core::pose::Pose const &) | protocols::seeded_abinitio::GrowPeptides | virtual |
| parse_state(SerializableState const &state) | protocols::moves::Mover | virtual |
| Pose typedef | protocols::moves::Mover | |
| PoseCOP typedef | protocols::moves::Mover | |
| register_options() | protocols::moves::Mover | inlinestatic |
| reinitialize_for_each_job() const | protocols::moves::Mover | virtual |
| reinitialize_for_new_input() const | protocols::moves::Mover | virtual |
| reset_status() | protocols::moves::Mover | |
| save_state(SerializableState &state) | protocols::moves::Mover | virtual |
| scorefxn_ | protocols::seeded_abinitio::GrowPeptides | private |
| seed_foldtree_ | protocols::seeded_abinitio::GrowPeptides | private |
| seq_ | protocols::seeded_abinitio::GrowPeptides | private |
| sequence_chunks_ | protocols::seeded_abinitio::GrowPeptides | private |
| set_current_job(protocols::jobdist::BasicJobCOP job) | protocols::moves::Mover | |
| set_current_tag(std::string const &new_tag) | protocols::moves::Mover | inline |
| set_input_pose(PoseCOP pose) | protocols::moves::Mover | virtual |
| set_last_move_status(MoverStatus status) | protocols::moves::Mover | protected |
| set_native_pose(PoseCOP pose) | protocols::moves::Mover | virtual |
| setup_cached_observers(core::pose::Pose &pose) | protocols::seeded_abinitio::GrowPeptides | private |
| show(std::ostream &output=std::cout) const | protocols::moves::Mover | virtual |
| Strings typedef | protocols::moves::Mover | |
| TagCOP typedef | protocols::moves::Mover | |
| template_pdb_ | protocols::seeded_abinitio::GrowPeptides | private |
| template_presence | protocols::seeded_abinitio::GrowPeptides | private |
| test_move(Pose &pose) | protocols::moves::Mover | inlinevirtual |
| type() const | protocols::moves::Mover | inline |
| type(const std::string &type_in) | protocols::moves::Mover | inline |
| verteces_ | protocols::seeded_abinitio::GrowPeptides | private |
| ~GrowPeptides() | protocols::seeded_abinitio::GrowPeptides | virtual |
| ~Mover() | protocols::moves::Mover | virtual |
1.8.7