| add_rotamer(RotamerOneValueOP const &rotamer) | protocols::rotamer_sampler::RotamerOneValueComb | inlinevirtual |
| protocols::rotamer_sampler::RotamerSizedComb::add_rotamer(RotamerSizedOP const &rotamer) | protocols::rotamer_sampler::RotamerSizedComb | inlinevirtual |
| apply(core::pose::Pose &pose) | protocols::rotamer_sampler::rigid_body::RigidBodyRotamer | virtual |
| apply(core::pose::Pose &pose, Size const id) | protocols::rotamer_sampler::rigid_body::RigidBodyRotamer | virtual |
| apply(core::pose::Pose &pose, core::conformation::Residue const &moving_residue_at_origin) | protocols::rotamer_sampler::rigid_body::RigidBodyRotamer | |
| apply(core::pose::Pose &pose, core::conformation::Residue const &moving_residue_at_origin, Size const id) | protocols::rotamer_sampler::rigid_body::RigidBodyRotamer | |
| apply(core::conformation::Residue &residue_initially_at_origin) | protocols::rotamer_sampler::rigid_body::RigidBodyRotamer | |
| apply(Vector &xyz_initially_at_origin, Size const seqpos) | protocols::rotamer_sampler::rigid_body::RigidBodyRotamer | |
| protocols::moves::Mover::apply(core::io::serialization::PipeMap &pmap) | protocols::moves::Mover | virtual |
| apply_by_jump(pose::Pose &pose, Size const &seq_num, core::kinematics::Stub const &moving_res_stub) | protocols::rotamer_sampler::rigid_body::RigidBodyRotamer | private |
| calculate_jump(pose::Pose &pose, Size const seq_num, kinematics::Stub const &moving_res_stub) | protocols::rotamer_sampler::rigid_body::RigidBodyRotamer | private |
| clear_info() | protocols::moves::Mover | inlinevirtual |
| clear_rotamer() | protocols::rotamer_sampler::RotamerSizedComb | inlinevirtual |
| clone() const | protocols::moves::Mover | virtual |
| create() | protocols::moves::Mover | virtual |
| fast_forward(Size const sampler_number) | protocols::rotamer_sampler::RotamerSizedComb | |
| protocols::rotamer_sampler::RotamerSized::fast_forward() | protocols::rotamer_sampler::RotamerSized | inlinevirtual |
| fast_forward_to_end() | protocols::rotamer_sampler::rigid_body::RigidBodyRotamer | |
| fast_forward_to_next_euler_gamma() | protocols::rotamer_sampler::rigid_body::RigidBodyRotamer | |
| fast_forward_to_next_translation() | protocols::rotamer_sampler::rigid_body::RigidBodyRotamer | |
| Filters_map typedef | protocols::moves::Mover | |
| fresh_instance() const | protocols::moves::Mover | virtual |
| get_additional_output() | protocols::moves::Mover | virtual |
| get_current_job() const | protocols::moves::Mover | |
| get_current_tag() const | protocols::moves::Mover | inline |
| get_input_pose() const | protocols::moves::Mover | |
| get_last_move_status() const | protocols::moves::Mover | |
| get_name() const | protocols::rotamer_sampler::RotamerOneValueComb | inlinevirtual |
| get_native_pose() const | protocols::moves::Mover | |
| get_residue_at_origin(Size const seqpos) | protocols::rotamer_sampler::rigid_body::RigidBodyRotamer | |
| get_stub() | protocols::rotamer_sampler::rigid_body::RigidBodyRotamer | |
| get_stub(utility::vector1< Size > const &id_list) | protocols::rotamer_sampler::rigid_body::RigidBodyRotamer | |
| get_stub(Size const id) | protocols::rotamer_sampler::rigid_body::RigidBodyRotamer | |
| get_type() const | protocols::moves::Mover | inline |
| get_value_list(Size const id) | protocols::rotamer_sampler::RotamerOneValueComb | |
| get_value_list(utility::vector1< Size > const &id_list) | protocols::rotamer_sampler::RotamerOneValueComb | |
| get_values() | protocols::rotamer_sampler::rigid_body::RigidBodyRotamer | |
| id() const | protocols::rotamer_sampler::RotamerSized | inline |
| id2list(core::Size const id) const | protocols::rotamer_sampler::RotamerSizedComb | protected |
| id_ | protocols::rotamer_sampler::RotamerSized | protected |
| id_list_ | protocols::rotamer_sampler::RotamerSizedComb | protected |
| info() | protocols::moves::Mover | inlinevirtual |
| info() const | protocols::moves::Mover | inlinevirtual |
| init() | protocols::rotamer_sampler::rigid_body::RigidBodyRotamer | virtual |
| is_init() const | protocols::rotamer_sampler::RotamerBase | inlineprotected |
| jump_ | protocols::rotamer_sampler::rigid_body::RigidBodyRotamer | private |
| jump_atom_id_ | protocols::rotamer_sampler::rigid_body::RigidBodyRotamer | private |
| last_proposal_density_ratio() | protocols::moves::Mover | inlinevirtual |
| list2id(utility::vector1< core::Size > const &id_list) const | protocols::rotamer_sampler::RotamerSizedComb | protected |
| Mover() | protocols::moves::Mover | |
| Mover(std::string const &type_name) | protocols::moves::Mover | |
| Mover(Mover const &other) | protocols::moves::Mover | |
| moving_partition_res() const | protocols::rotamer_sampler::rigid_body::RigidBodyRotamer | inline |
| moving_partition_res_ | protocols::rotamer_sampler::rigid_body::RigidBodyRotamer | private |
| moving_res() const | protocols::rotamer_sampler::rigid_body::RigidBodyRotamer | inline |
| moving_res_ | protocols::rotamer_sampler::rigid_body::RigidBodyRotamer | private |
| moving_res_stub_ | protocols::rotamer_sampler::rigid_body::RigidBodyRotamer | private |
| moving_residue_at_origin() const | protocols::rotamer_sampler::rigid_body::RigidBodyRotamer | inline |
| moving_residue_at_origin_ | protocols::rotamer_sampler::rigid_body::RigidBodyRotamer | private |
| name() | protocols::moves::Mover | inlinestatic |
| not_end() const | protocols::rotamer_sampler::RotamerSized | virtual |
| operator++() | protocols::rotamer_sampler::RotamerSizedComb | virtual |
| operator=(Mover const &other) | protocols::moves::Mover | |
| parse_def(utility::lua::LuaObject const &def, utility::lua::LuaObject const &score_fxns, utility::lua::LuaObject const &tasks, MoverCacheSP cache) | protocols::moves::Mover | virtual |
| parse_my_tag(TagCOP tag, basic::datacache::DataMap &data, Filters_map const &filters, Movers_map const &movers, Pose const &pose) | protocols::moves::Mover | virtual |
| parse_state(SerializableState const &state) | protocols::moves::Mover | virtual |
| Pose typedef | protocols::moves::Mover | |
| pose_at_origin() | protocols::rotamer_sampler::rigid_body::RigidBodyRotamer | |
| pose_at_origin_ | protocols::rotamer_sampler::rigid_body::RigidBodyRotamer | private |
| PoseCOP typedef | protocols::moves::Mover | |
| random() const | protocols::rotamer_sampler::RotamerBase | inlinevirtual |
| reference_res() const | protocols::rotamer_sampler::rigid_body::RigidBodyRotamer | inline |
| reference_res_ | protocols::rotamer_sampler::rigid_body::RigidBodyRotamer | private |
| reference_stub() | protocols::rotamer_sampler::rigid_body::RigidBodyRotamer | inline |
| reference_stub_ | protocols::rotamer_sampler::rigid_body::RigidBodyRotamer | private |
| register_options() | protocols::moves::Mover | inlinestatic |
| reinitialize_for_each_job() const | protocols::moves::Mover | virtual |
| reinitialize_for_new_input() const | protocols::moves::Mover | virtual |
| reset() | protocols::rotamer_sampler::RotamerSizedComb | virtual |
| reset_status() | protocols::moves::Mover | |
| RigidBodyRotamer(pose::Pose const &pose, Size const moving_res) | protocols::rotamer_sampler::rigid_body::RigidBodyRotamer | |
| RigidBodyRotamer(Size const moving_res, core::conformation::Residue const &moving_residue_at_origin, core::kinematics::Stub const &reference_stub) | protocols::rotamer_sampler::rigid_body::RigidBodyRotamer | |
| rotamer_list_ | protocols::rotamer_sampler::RotamerSizedComb | protected |
| RotamerBase() | protocols::rotamer_sampler::RotamerBase | inline |
| RotamerOneValueComb() | protocols::rotamer_sampler::RotamerOneValueComb | |
| RotamerSized() | protocols::rotamer_sampler::RotamerSized | |
| RotamerSizedComb() | protocols::rotamer_sampler::RotamerSizedComb | |
| RotamerSizedComb(RotamerSizedOP outer_loop_rotamer, RotamerSizedOP inner_loop_rotamer) | protocols::rotamer_sampler::RotamerSizedComb | |
| save_state(SerializableState &state) | protocols::moves::Mover | virtual |
| set_and_reinit(T ¶ms, T const &setting) | protocols::rotamer_sampler::RotamerBase | inlineprotected |
| set_current_job(protocols::jobdist::BasicJobCOP job) | protocols::moves::Mover | |
| set_current_tag(std::string const &new_tag) | protocols::moves::Mover | inline |
| set_euler_alpha_values(Real const centroid_euler_alpha_min, Real const centroid_euler_alpha_max, Real const centroid_euler_alpha_bin) | protocols::rotamer_sampler::rigid_body::RigidBodyRotamer | |
| set_euler_gamma_values(Real const centroid_euler_gamma_min, Real const centroid_euler_gamma_max, Real const centroid_euler_gamma_bin) | protocols::rotamer_sampler::rigid_body::RigidBodyRotamer | |
| set_euler_z_values(Real const centroid_euler_z_min, Real const centroid_euler_z_max, Real const centroid_euler_z_bin) | protocols::rotamer_sampler::rigid_body::RigidBodyRotamer | |
| set_id(Size const setting) | protocols::rotamer_sampler::RotamerSized | inlinevirtual |
| set_init(bool const setting) | protocols::rotamer_sampler::RotamerBase | inlineprotected |
| set_input_pose(PoseCOP pose) | protocols::moves::Mover | virtual |
| set_last_move_status(MoverStatus status) | protocols::moves::Mover | protected |
| set_native_pose(PoseCOP pose) | protocols::moves::Mover | virtual |
| set_random(bool const setting) | protocols::rotamer_sampler::RotamerSizedComb | virtual |
| set_x_values(Real const centroid_x_min, Real const centroid_x_max, Real const centroid_x_bin) | protocols::rotamer_sampler::rigid_body::RigidBodyRotamer | |
| set_y_values(Real const centroid_y_min, Real const centroid_y_max, Real const centroid_y_bin) | protocols::rotamer_sampler::rigid_body::RigidBodyRotamer | |
| set_z_values(Real const centroid_z_min, Real const centroid_z_max, Real const centroid_z_bin) | protocols::rotamer_sampler::rigid_body::RigidBodyRotamer | |
| show(std::ostream &output=std::cout) const | protocols::moves::Mover | virtual |
| size() const | protocols::rotamer_sampler::RotamerSizedComb | inlinevirtual |
| Strings typedef | protocols::moves::Mover | |
| TagCOP typedef | protocols::moves::Mover | |
| test_move(Pose &pose) | protocols::moves::Mover | inlinevirtual |
| TorsionList typedef | protocols::rotamer_sampler::RotamerBase | |
| transform_single_residue(pose::Pose &pose, Size const &seq_num, core::conformation::Residue const &rsd_at_origin, core::kinematics::Stub const &moving_res_stub) | protocols::rotamer_sampler::rigid_body::RigidBodyRotamer | private |
| type() const | protocols::rotamer_sampler::rigid_body::RigidBodyRotamer | inlinevirtual |
| protocols::moves::Mover::type(const std::string &type_in) | protocols::moves::Mover | inline |
| value_range() | protocols::rotamer_sampler::rigid_body::RigidBodyRotamer | inline |
| value_range_ | protocols::rotamer_sampler::rigid_body::RigidBodyRotamer | private |
| ~Mover() | protocols::moves::Mover | virtual |
| ~RigidBodyRotamer() | protocols::rotamer_sampler::rigid_body::RigidBodyRotamer | |
| ~RotamerBase() | protocols::rotamer_sampler::RotamerBase | inlinevirtual |
| ~RotamerOneValueComb() | protocols::rotamer_sampler::RotamerOneValueComb | virtual |
| ~RotamerSized() | protocols::rotamer_sampler::RotamerSized | virtual |
| ~RotamerSizedComb() | protocols::rotamer_sampler::RotamerSizedComb | virtual |
1.8.7