protocols::stepwise::screener::SugarInstantiator Class Reference

#include <SugarInstantiator.hh>

Public Member Functions
	SugarInstantiator (pose::Pose &screening_pose, Size const moving_res, Distance const o2prime_instantiation_distance_cutoff)
	~SugarInstantiator ()
virtual bool	check_screen ()
virtual std::string	name () const
virtual StepWiseScreenerType	type () const
virtual void	add_mover (moves::CompositionMoverOP update_mover, moves::CompositionMoverOP restore_mover)
Public Member Functions inherited from protocols::stepwise::screener::SampleApplier
	SampleApplier ()
	SampleApplier (pose::Pose &pose, bool const apply_residue_alternative_sampler=true)
	~SampleApplier ()
virtual void	get_update (rotamer_sampler::RotamerBaseOP sampler)
void	apply_mover (moves::CompositionMoverOP mover, Size const i, Size const j)
pose::Pose &	pose ()
void	set_apply_residue_alternative_sampler_ (bool const setting)
Public Member Functions inherited from protocols::stepwise::screener::StepWiseScreener
	StepWiseScreener ()
	~StepWiseScreener ()
virtual void	fast_forward (rotamer_sampler::RotamerBaseOP)
Size const &	count () const
void	increment_count ()
void	reset ()
void	set_ok_to_increment (bool const setting)

Private Member Functions
bool	check_moving_sugar (pose::Pose &pose, Size const moving_res)

Private Attributes
pose::Pose &	screening_pose_
Size const	moving_res_
Distance const	o2prime_instantiation_distance_cutoff_
bool	instantiate_sugar_

Additional Inherited Members
Protected Attributes inherited from protocols::stepwise::screener::SampleApplier
pose::Pose &	pose_
core::conformation::ResidueOP	moving_rsd_at_origin
utility::vector1 < core::conformation::ResidueOP >	moving_rsd_at_origin_list
bool	apply_residue_alternative_sampler_

Constructor & Destructor Documentation

protocols::stepwise::screener::SugarInstantiator::SugarInstantiator	(	pose::Pose &	screening_pose,
		Size const	moving_res,
		Distance const	o2prime_instantiation_distance_cutoff
	)

protocols::stepwise::screener::SugarInstantiator::~SugarInstantiator

(

)

Member Function Documentation

void protocols::stepwise::screener::SugarInstantiator::add_mover ( moves::CompositionMoverOP  update_mover, moves::CompositionMoverOP  restore_mover  )

virtual

Reimplemented from protocols::stepwise::screener::StepWiseScreener.

References instantiate_sugar_, and moving_res_.

bool protocols::stepwise::screener::SugarInstantiator::check_moving_sugar ( pose::Pose &  pose, Size const  moving_res  )

private

References core::conformation::Residue::has_variant_type(), core::chemical::ResidueType::heavyatom_has_polar_hydrogens(), core::chemical::ResidueType::heavyatom_is_an_acceptor(), core::chemical::ResidueType::is_virtual(), core::conformation::Residue::is_virtual_residue(), j, length, moving_res_, core::conformation::Residue::nheavyatoms(), o2prime_instantiation_distance_cutoff_, core::pose::Pose::residue(), core::pose::Pose::residue_type(), core::pose::Pose::total_residue(), and core::conformation::Residue::xyz().

Referenced by check_screen().

bool protocols::stepwise::screener::SugarInstantiator::check_screen ( )

virtual

Reimplemented from protocols::stepwise::screener::SampleApplier.

References check_moving_sugar(), instantiate_sugar_, moving_res_, and screening_pose_.

virtual std::string protocols::stepwise::screener::SugarInstantiator::name ( ) const

inlinevirtual

Reimplemented from protocols::stepwise::screener::SampleApplier.

virtual StepWiseScreenerType protocols::stepwise::screener::SugarInstantiator::type ( ) const

inlinevirtual

Reimplemented from protocols::stepwise::screener::SampleApplier.

References protocols::stepwise::screener::SUGAR_INSTANTIATOR.

Member Data Documentation

bool protocols::stepwise::screener::SugarInstantiator::instantiate_sugar_

private

Referenced by add_mover(), and check_screen().

Size const protocols::stepwise::screener::SugarInstantiator::moving_res_

private

Referenced by add_mover(), check_moving_sugar(), and check_screen().

Distance const protocols::stepwise::screener::SugarInstantiator::o2prime_instantiation_distance_cutoff_

private

Referenced by check_moving_sugar().

pose::Pose& protocols::stepwise::screener::SugarInstantiator::screening_pose_

private

Referenced by check_screen().

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The documentation for this class was generated from the following files:

• symlinks/rosetta/src/protocols/stepwise/screener/SugarInstantiator.hh
• symlinks/rosetta/src/protocols/stepwise/screener/SugarInstantiator.cc