protocols::frag_picker::scores::PartialSecondarySimilarity Member List

This is the complete list of members for protocols::frag_picker::scores::PartialSecondarySimilarity, including all inherited members.

cached_score(FragmentCandidateOP f, FragmentScoreMapOP empty_map)	protocols::frag_picker::scores::PartialSecondarySimilarity	virtual
cached_scores_id_	protocols::frag_picker::scores::PartialSecondarySimilarity	private
CachingScoringMethod(Size priority, Real lowest_acceptable_value, bool use_lowest, std::string name)	protocols::frag_picker::scores::CachingScoringMethod	inline
clean_up()	protocols::frag_picker::scores::PartialSecondarySimilarity	inlinevirtual
do_caching(VallChunkOP)	protocols::frag_picker::scores::PartialSecondarySimilarity	virtual
FragmentScoringMethod(Size priority, Real lowest_acceptable_value, bool use_lowest, std::string name)	protocols::frag_picker::scores::FragmentScoringMethod	inline
get_id()	protocols::frag_picker::scores::FragmentScoringMethod	inline
get_min_allowed_score()	protocols::frag_picker::scores::FragmentScoringMethod	inline
get_prediction_name()	protocols::frag_picker::scores::PartialSecondarySimilarity	inline
get_priority()	protocols::frag_picker::scores::FragmentScoringMethod	inline
get_score_name()	protocols::frag_picker::scores::FragmentScoringMethod	inline
get_use_lowest()	protocols::frag_picker::scores::FragmentScoringMethod	inline
id_	protocols::frag_picker::scores::FragmentScoringMethod	protected
lowest_acceptable_value_	protocols::frag_picker::scores::FragmentScoringMethod	protected
name_	protocols::frag_picker::scores::FragmentScoringMethod	protected
norm_query_E_	protocols::frag_picker::scores::PartialSecondarySimilarity	private
norm_query_H_	protocols::frag_picker::scores::PartialSecondarySimilarity	private
norm_query_L_	protocols::frag_picker::scores::PartialSecondarySimilarity	private
PartialSecondarySimilarity(Size priority, Real lowest_acceptable_value, bool use_lowest, core::fragment::SecondaryStructureOP query_prediction, std::string prediction_name, Size sequence_length, Size longest_vall_chunk)	protocols::frag_picker::scores::PartialSecondarySimilarity
prediction_name_	protocols::frag_picker::scores::PartialSecondarySimilarity	private
priority_	protocols::frag_picker::scores::FragmentScoringMethod	protected
query_len_	protocols::frag_picker::scores::PartialSecondarySimilarity	private
raw_probs_	protocols::frag_picker::scores::PartialSecondarySimilarity	private
score(FragmentCandidateOP, FragmentScoreMapOP)	protocols::frag_picker::scores::PartialSecondarySimilarity	virtual
scores_	protocols::frag_picker::scores::PartialSecondarySimilarity	protected
set_id(Size id)	protocols::frag_picker::scores::FragmentScoringMethod	inline
set_min_allowed_score(Real lowest_acceptable_value)	protocols::frag_picker::scores::FragmentScoringMethod	inline
use_lowest_	protocols::frag_picker::scores::FragmentScoringMethod	protected
~PartialSecondarySimilarity()	protocols::frag_picker::scores::PartialSecondarySimilarity	inline