protocols::toolbox::task_operations::CrystalContactsOperation Class Reference

#include <CrystalContactsOperation.hh>

Public Member Functions
	CrystalContactsOperation (core::Real all_gap=2, core::Real polar_gap=0, core::Real max_buried_sasa_=0.01, bool invert=false)
virtual	~CrystalContactsOperation ()
virtual core::pack::task::operation::TaskOperationOP	clone () const
virtual void	apply (core::pose::Pose const &, core::pack::task::PackerTask &) const
void	parse_tag (TagCOP tag, DataMap &)
void	parse_def (utility::lua::LuaObject const &def)

Private Attributes
core::Real	all_gap_
core::Real	polar_gap_
core::Real	max_buried_sasa_
bool	invert_

Constructor & Destructor Documentation

protocols::toolbox::task_operations::CrystalContactsOperation::CrystalContactsOperation	(	core::Real	all_gap = 2,
		core::Real	polar_gap = 0,
		core::Real	max_buried_sasa_ = 0.01,
		bool	invert = false
	)

Referenced by clone().

protocols::toolbox::task_operations::CrystalContactsOperation::~CrystalContactsOperation ( )

virtual

Member Function Documentation

void protocols::toolbox::task_operations::CrystalContactsOperation::apply ( core::pose::Pose const &  pose, core::pack::task::PackerTask &  task  ) const

virtual

Implements core::pack::task::operation::TaskOperation.

References all_gap_, core::scoring::calc_per_atom_sasa_sc(), contacts, numeric::xyzVector< class >::distance_squared(), extract_asymmetric_unit(), invert_, core::conformation::Residue::is_protein(), is_symmetric(), max_buried_sasa_, core::conformation::Residue::name3(), core::conformation::Residue::nbr_radius(), core::pack::task::PackerTask::nonconst_residue_task(), polar_gap_, core::pack::task::ResidueLevelTask::prevent_repacking(), core::pose::Pose::residue(), core::pose::symmetry::symmetry_info(), protocols::TR, utility_exit_with_message, and core::conformation::Residue::xyz().

core::pack::task::operation::TaskOperationOP protocols::toolbox::task_operations::CrystalContactsOperation::clone ( ) const

virtual

Implements core::pack::task::operation::TaskOperation.

References CrystalContactsOperation().

void protocols::toolbox::task_operations::CrystalContactsOperation::parse_def

(

utility::lua::LuaObject const &

def

)

References all_gap_, max_buried_sasa_, polar_gap_, and utility::lua::LuaObject::to().

void protocols::toolbox::task_operations::CrystalContactsOperation::parse_tag	(	TagCOP	tag,
		DataMap &
	)

References all_gap_, invert_, max_buried_sasa_, and polar_gap_.

Member Data Documentation

core::Real protocols::toolbox::task_operations::CrystalContactsOperation::all_gap_

private

Referenced by apply(), parse_def(), and parse_tag().

bool protocols::toolbox::task_operations::CrystalContactsOperation::invert_

private

Referenced by apply(), and parse_tag().

core::Real protocols::toolbox::task_operations::CrystalContactsOperation::max_buried_sasa_

private

Referenced by apply(), parse_def(), and parse_tag().

core::Real protocols::toolbox::task_operations::CrystalContactsOperation::polar_gap_

private

Referenced by apply(), parse_def(), and parse_tag().

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The documentation for this class was generated from the following files:

• symlinks/rosetta/src/protocols/toolbox/task_operations/CrystalContactsOperation.hh
• symlinks/rosetta/src/protocols/toolbox/task_operations/CrystalContactsOperation.cc