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Rosetta Protocols
2014.16.56682
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Rosetta Protocols
2014.16.56682
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added by olga and flo 1/2011 class to exclude positions at the n and c termini of proteins from matching More...
#include <MatchPositionModifiers.hh>
Public Member Functions | |
| RemoveNorCTermMPM (utility::vector1< std::string > const &input_tokens) | |
| ~RemoveNorCTermMPM () | |
| virtual utility::vector1 < core::Size > | modified_match_positions (utility::vector1< core::Size > const &original_positions, core::pose::Pose const &match_pose, protocols::match::MatcherTaskCOP mtask) const |
| the positions in the vector1< Size > that is returned by this function will replace the match positions in the MatcherTask. More... | |
 Public Member Functions inherited from protocols::match::MatchPositionModifier | |
| MatchPositionModifier () | |
| virtual | ~MatchPositionModifier () |
Private Attributes | |
| core::Size | cterm_length_ |
| core::Size | nterm_length_ |
added by olga and flo 1/2011 class to exclude positions at the n and c termini of proteins from matching
| protocols::match::RemoveNorCTermMPM::RemoveNorCTermMPM | ( | utility::vector1< std::string > const & | input_tokens | ) |
References cterm_length_, nterm_length_, and runtime_assert.
| protocols::match::RemoveNorCTermMPM::~RemoveNorCTermMPM | ( | ) |
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virtual |
the positions in the vector1< Size > that is returned by this function will replace the match positions in the MatcherTask.
Implements protocols::match::MatchPositionModifier.
References cterm_length_, core::chemical::ResidueType::is_protein(), nterm_length_, core::pose::Pose::residue_type(), and core::pose::Pose::total_residue().
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private |
Referenced by modified_match_positions(), and RemoveNorCTermMPM().
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private |
Referenced by modified_match_positions(), and RemoveNorCTermMPM().
1.8.7