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Rosetta Protocols
2014.16.56682
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#include <protocols/stepwise/sampling/rna/sugar/StepWiseRNA_VirtualSugarSampler.hh>#include <protocols/stepwise/sampling/rna/sugar/StepWiseRNA_VirtualSugarUtil.hh>#include <protocols/stepwise/sampling/rna/phosphate/PhosphateUtil.hh>#include <protocols/stepwise/sampling/rna/checker/RNA_VDW_BinChecker.hh>#include <protocols/stepwise/sampling/rna/checker/AtrRepChecker.hh>#include <protocols/stepwise/sampling/rna/checker/ChainClosableGeometryChecker.hh>#include <protocols/stepwise/sampling/rna/checker/ChainClosureChecker.hh>#include <protocols/stepwise/sampling/rna/StepWiseRNA_JobParameters.hh>#include <protocols/stepwise/sampling/rna/StepWiseRNA_Util.hh>#include <protocols/stepwise/sampling/rna/StepWiseRNA_OutputData.hh>#include <protocols/stepwise/sampling/rna/StepWiseRNA_Modeler.hh>#include <protocols/stepwise/sampling/rna/StepWiseRNA_ModelerOptions.hh>#include <protocols/rotamer_sampler/rna/RNA_SuiteRotamer.hh>#include <protocols/rotamer_sampler/rna/RNA_NucleosideRotamer.hh>#include <protocols/farna/RNA_LoopCloser.hh>#include <core/optimization/AtomTreeMinimizer.hh>#include <core/optimization/MinimizerOptions.hh>#include <core/types.hh>#include <core/chemical/ChemicalManager.hh>#include <core/chemical/util.hh>#include <core/chemical/VariantType.hh>#include <core/chemical/ResidueTypeSet.hh>#include <core/chemical/AtomType.hh>#include <core/chemical/rna/RNA_Util.hh>#include <core/conformation/Residue.hh>#include <core/pose/Pose.hh>#include <core/pose/util.hh>#include <core/pose/rna/RNA_Util.hh>#include <core/pose/full_model_info/FullModelInfoUtil.hh>#include <core/scoring/ScoreFunctionFactory.hh>#include <core/scoring/rna/RNA_TorsionPotential.hh>#include <core/scoring/constraints/ConstraintSet.hh>#include <core/scoring/constraints/util.hh>#include <core/scoring/ScoreFunction.hh>#include <core/scoring/Energies.hh>#include <core/scoring/EnergyMap.hh>#include <numeric/conversions.hh>#include <ObjexxFCL/format.hh>#include <ObjexxFCL/string.functions.hh>#include <utility/tools/make_vector1.hh>#include <basic/Tracer.hh>Namespaces | |
| protocols | |
| The instance of Loops contained by AbrelaxApplication should be replaced by a LoopsOP. | |
| protocols::stepwise | |
| protocols::stepwise::sampling | |
| protocols::stepwise::sampling::rna | |
| protocols::stepwise::sampling::rna::sugar | |
Variables | |
| static basic::Tracer | TR ("protocols.stepwise.rna.StepWiseRNA_VirtualSugarSampler") |
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static |
1.8.7