protocols::fldsgn::topology::Helix Class Reference

#include <SS_Info2.hh>

Public Member Functions
	Helix ()
	default constructor More...
	Helix (Size const &begin, Size const &end)
	value constructor More...
	Helix (Helix const &s)
	copy constructor More...
	~Helix ()
	destructor More...
Real	bend () const
void	calc_geometry (BB_Pos const &bbpos)
	calc geometry of helix More...
Public Member Functions inherited from protocols::fldsgn::topology::SS_Base
	SS_Base ()
	default constructor More...
	SS_Base (Size const &begin, Size const &end)
	value constructor More...
	SS_Base (SS_Base const &s)
	value constructor More...
virtual	~SS_Base ()
	destructor More...
Size	begin () const
Size	end () const
Size	length () const
Vector	orient () const
Vector	Nend_orient () const
Vector	Cend_orient () const
Vector	Nend_pos () const
Vector	Cend_pos () const
Vector	mid_pos () const
bool	is_geometry_initialized () const

Private Types
typedef SS_Base	Parent
typedef core::Vector	Vector

Private Attributes
Real	bend_

Friends
std::ostream &	operator<< (std::ostream &out, const Helix &hx)

Additional Inherited Members
Public Types inherited from protocols::fldsgn::topology::SS_Base
typedef core::Size	Size
typedef core::Real	Real
typedef core::Vector	Vector
typedef protocols::fldsgn::topology::BB_Pos	BB_Pos
Protected Member Functions inherited from protocols::fldsgn::topology::SS_Base
void	orient (Vector const &v)
	set vector from Ca of Nterminal to Ca of Cterminal More...
void	Nend_orient (Vector const &v)
	set orient vector of N-terminal SS More...
void	Cend_orient (Vector const &v)
	set orient vector of C-terminal SS More...
void	Nend_pos (Vector const &v)
	set positional vector of N-terminal More...
void	Cend_pos (Vector const &v)
	set positional vector of C-terminal More...
void	mid_pos (Vector const &v)
	set positional vector of mid point More...
void	is_geometry_initialized (bool const v)
	set geometry is initialized or not More...

Member Typedef Documentation

typedef SS_Base protocols::fldsgn::topology::Helix::Parent

private

typedef core::Vector protocols::fldsgn::topology::Helix::Vector

private

Constructor & Destructor Documentation

protocols::fldsgn::topology::Helix::Helix

(

)

default constructor

protocols::fldsgn::topology::Helix::Helix	(	Size const &	begin,
		Size const &	end
	)

value constructor

protocols::fldsgn::topology::Helix::Helix

(

Helix const &

s

)

copy constructor

protocols::fldsgn::topology::Helix::~Helix

(

)

destructor

Member Function Documentation

Real protocols::fldsgn::topology::Helix::bend ( ) const

inline

References bend_.

void protocols::fldsgn::topology::Helix::calc_geometry

(

BB_Pos const &

bbpos

)

calc geometry of helix

References angle_of(), protocols::fldsgn::topology::SS_Base::begin(), bend_, protocols::fldsgn::topology::BB_Pos::C(), protocols::fldsgn::topology::BB_Pos::CA(), protocols::fldsgn::topology::SS_Base::Cend_orient(), protocols::fldsgn::topology::SS_Base::Cend_pos(), numeric::conversions::degrees(), protocols::fldsgn::topology::SS_Base::end(), protocols::fldsgn::topology::SS_Base::is_geometry_initialized(), protocols::fldsgn::topology::SS_Base::mid_pos(), protocols::fldsgn::topology::BB_Pos::N(), protocols::fldsgn::topology::SS_Base::Nend_orient(), protocols::fldsgn::topology::SS_Base::Nend_pos(), numeric::xyzVector< class >::normalized(), protocols::fldsgn::topology::SS_Base::orient(), s1, and s2.

Friends And Related Function Documentation

std::ostream& operator<< ( std::ostream &  out, const Helix &  hx  )

friend

Member Data Documentation

Real protocols::fldsgn::topology::Helix::bend_

private

Referenced by bend(), and calc_geometry().

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The documentation for this class was generated from the following files:

• symlinks/rosetta/src/protocols/fldsgn/topology/SS_Info2.hh
• symlinks/rosetta/src/protocols/fldsgn/topology/SS_Info2.cc