| add_compositeSegmentMover(RBSegmentMoverOP newMover) | protocols::rbsegment_relax::RBSegmentRelax | |
| add_genericRBMover(RBSegmentMoverOP newMover) | protocols::rbsegment_relax::RBSegmentRelax | |
| add_helixMover(RBSegmentMoverOP newMover) | protocols::rbsegment_relax::RBSegmentRelax | |
| add_strandMover(RBSegmentMoverOP newMover) | protocols::rbsegment_relax::RBSegmentRelax | |
| add_wholeStructureMover(protocols::moves::MoverOP newMover) | protocols::rbsegment_relax::RBSegmentRelax | |
| apply(core::pose::Pose &pose) | protocols::rbsegment_relax::RBSegmentRelax | virtual |
| protocols::moves::Mover::apply(core::io::serialization::PipeMap &pmap) | protocols::moves::Mover | virtual |
| bootstrap_ | protocols::rbsegment_relax::RBSegmentRelax | private |
| clear_info() | protocols::moves::Mover | inlinevirtual |
| clear_movesets() | protocols::rbsegment_relax::RBSegmentRelax | |
| clone() const | protocols::moves::Mover | virtual |
| CompositeSegmentMoveSet_ | protocols::rbsegment_relax::RBSegmentRelax | private |
| create() | protocols::moves::Mover | virtual |
| cst_seqwidth_ | protocols::rbsegment_relax::RBSegmentRelax | private |
| cst_stdev_ | protocols::rbsegment_relax::RBSegmentRelax | private |
| cst_weight_ | protocols::rbsegment_relax::RBSegmentRelax | private |
| cst_width_ | protocols::rbsegment_relax::RBSegmentRelax | private |
| cycles_ | protocols::rbsegment_relax::RBSegmentRelax | private |
| Filters_map typedef | protocols::moves::Mover | |
| final_temp | protocols::rbsegment_relax::RBSegmentRelax | private |
| fix_ligands_ | protocols::rbsegment_relax::RBSegmentRelax | private |
| frag_libs_ | protocols::rbsegment_relax::RBSegmentRelax | private |
| fresh_instance() const | protocols::moves::Mover | virtual |
| genericRB_sigR | protocols::rbsegment_relax::RBSegmentRelax | private |
| genericRB_sigT | protocols::rbsegment_relax::RBSegmentRelax | private |
| GenericRBMoveSet_ | protocols::rbsegment_relax::RBSegmentRelax | private |
| get_additional_output() | protocols::moves::Mover | virtual |
| get_current_job() const | protocols::moves::Mover | |
| get_current_tag() const | protocols::moves::Mover | inline |
| get_input_pose() const | protocols::moves::Mover | |
| get_last_move_status() const | protocols::moves::Mover | |
| get_name() const | protocols::rbsegment_relax::RBSegmentRelax | virtual |
| get_native_pose() const | protocols::moves::Mover | |
| get_type() const | protocols::moves::Mover | inline |
| helical_sigOffAxisR | protocols::rbsegment_relax::RBSegmentRelax | private |
| helical_sigOffAxisT | protocols::rbsegment_relax::RBSegmentRelax | private |
| helical_sigR | protocols::rbsegment_relax::RBSegmentRelax | private |
| helical_sigT | protocols::rbsegment_relax::RBSegmentRelax | private |
| HelixMoveSet_ | protocols::rbsegment_relax::RBSegmentRelax | private |
| info() | protocols::moves::Mover | inlinevirtual |
| info() const | protocols::moves::Mover | inlinevirtual |
| init_temp | protocols::rbsegment_relax::RBSegmentRelax | private |
| initialize(utility::vector1< core::fragment::FragSetOP > const &frag_libs, core::Real rnd=0.0) | protocols::rbsegment_relax::RBSegmentRelax | |
| last_proposal_density_ratio() | protocols::moves::Mover | inlinevirtual |
| loops_input_ | protocols::rbsegment_relax::RBSegmentRelax | private |
| mc_ | protocols::rbsegment_relax::RBSegmentRelax | private |
| Mover() | protocols::moves::Mover | |
| Mover(std::string const &type_name) | protocols::moves::Mover | |
| Mover(Mover const &other) | protocols::moves::Mover | |
| name() | protocols::moves::Mover | inlinestatic |
| no_lr_ | protocols::rbsegment_relax::RBSegmentRelax | private |
| operator=(Mover const &other) | protocols::moves::Mover | |
| parse_def(utility::lua::LuaObject const &def, utility::lua::LuaObject const &score_fxns, utility::lua::LuaObject const &tasks, MoverCacheSP cache) | protocols::moves::Mover | virtual |
| parse_my_tag(TagCOP tag, basic::datacache::DataMap &data, Filters_map const &filters, Movers_map const &movers, Pose const &pose) | protocols::moves::Mover | virtual |
| parse_state(SerializableState const &state) | protocols::moves::Mover | virtual |
| Pose typedef | protocols::moves::Mover | |
| PoseCOP typedef | protocols::moves::Mover | |
| rand_ | protocols::rbsegment_relax::RBSegmentRelax | private |
| randomness_ | protocols::rbsegment_relax::RBSegmentRelax | private |
| RBSegmentRelax() | protocols::rbsegment_relax::RBSegmentRelax | |
| RBSegmentRelax(core::scoring::ScoreFunctionOP scorefxn, utility::vector1< RBSegment > const &RBSegment_input, protocols::loops::Loops const &Loops_input) | protocols::rbsegment_relax::RBSegmentRelax | |
| rbsegs_input_ | protocols::rbsegment_relax::RBSegmentRelax | private |
| rbsegs_remap_ | protocols::rbsegment_relax::RBSegmentRelax | private |
| register_options() | protocols::moves::Mover | inlinestatic |
| reinitialize_for_each_job() const | protocols::moves::Mover | virtual |
| reinitialize_for_new_input() const | protocols::moves::Mover | virtual |
| reset_status() | protocols::moves::Mover | |
| save_state(SerializableState &state) | protocols::moves::Mover | virtual |
| scorefxn_ | protocols::rbsegment_relax::RBSegmentRelax | private |
| set_bootstrap(bool boot) | protocols::rbsegment_relax::RBSegmentRelax | inline |
| set_cst_weight(core::Real wt) | protocols::rbsegment_relax::RBSegmentRelax | |
| set_cst_width(core::Real width) | protocols::rbsegment_relax::RBSegmentRelax | |
| set_current_job(protocols::jobdist::BasicJobCOP job) | protocols::moves::Mover | |
| set_current_tag(std::string const &new_tag) | protocols::moves::Mover | inline |
| set_default_movemap() | protocols::rbsegment_relax::RBSegmentRelax | private |
| set_fix_ligands(bool fix) | protocols::rbsegment_relax::RBSegmentRelax | inline |
| set_genericRBMoveStepsize(core::Real trans, core::Real rot) | protocols::rbsegment_relax::RBSegmentRelax | |
| set_helicalMoveStepsize(core::Real onAxisTrans, core::Real onAxisRot, core::Real offAxisTrans, core::Real offAxisRot) | protocols::rbsegment_relax::RBSegmentRelax | |
| set_input_pose(PoseCOP pose) | protocols::moves::Mover | virtual |
| set_last_move_status(MoverStatus status) | protocols::moves::Mover | protected |
| set_native_pose(PoseCOP pose) | protocols::moves::Mover | virtual |
| set_ncycles(int ncycles) | protocols::rbsegment_relax::RBSegmentRelax | |
| set_randomize(core::Size rand) | protocols::rbsegment_relax::RBSegmentRelax | inline |
| set_skip_lr(bool skip) | protocols::rbsegment_relax::RBSegmentRelax | inline |
| set_temperature(core::Real start, core::Real final) | protocols::rbsegment_relax::RBSegmentRelax | |
| show(std::ostream &output=std::cout) const | protocols::moves::Mover | virtual |
| strand_sigOffAxisR | protocols::rbsegment_relax::RBSegmentRelax | private |
| strand_sigOffAxisT | protocols::rbsegment_relax::RBSegmentRelax | private |
| strand_sigR | protocols::rbsegment_relax::RBSegmentRelax | private |
| strand_sigT | protocols::rbsegment_relax::RBSegmentRelax | private |
| StrandMoveSet_ | protocols::rbsegment_relax::RBSegmentRelax | private |
| Strings typedef | protocols::moves::Mover | |
| TagCOP typedef | protocols::moves::Mover | |
| test_move(Pose &pose) | protocols::moves::Mover | inlinevirtual |
| type() const | protocols::moves::Mover | inline |
| type(const std::string &type_in) | protocols::moves::Mover | inline |
| WholeStructureMoveSet_ | protocols::rbsegment_relax::RBSegmentRelax | private |
| ~Mover() | protocols::moves::Mover | virtual |
| ~RBSegmentRelax() | protocols::rbsegment_relax::RBSegmentRelax | |