| bundle_size_ | protocols::features::helixAssembly::HelixBundleFeatures | private |
| calc_crossing_angles(core::pose::Pose const &pose, FragmentPair &fragment_pair) | protocols::features::helixAssembly::HelixBundleFeatures | |
| calc_fa_energy(core::pose::Pose const &pose, FragmentPair &fragment_pair) | protocols::features::helixAssembly::HelixBundleFeatures | |
| calc_pc_and_com(core::pose::Pose const &pose, HelicalFragmentOP fragment) | protocols::features::helixAssembly::HelixBundleFeatures | |
| check_relevant_residues(utility::vector1< bool > const &relevant_residues, core::Size res1) const | protocols::features::FeaturesReporter | |
| check_relevant_residues(utility::vector1< bool > const &relevant_residues, core::Size res1, core::Size res2) const | protocols::features::FeaturesReporter | |
| check_relevant_residues(utility::vector1< bool > const &relevant_residues, utility::vector1< core::Size > const &residues) const | protocols::features::FeaturesReporter | |
| check_relevant_residues_range(utility::vector1< bool > const &relevant_residues, core::Size res1, core::Size res2) const | protocols::features::FeaturesReporter | |
| delete_record(StructureID, utility::sql_database::sessionOP) | protocols::features::FeaturesReporter | inlinevirtual |
| delete_records_from_table(std::string const &table_name, StructureID struct_id, utility::sql_database::sessionOP db_session) | protocols::features::FeaturesReporter | protected |
| features_reporter_dependencies() const | protocols::features::helixAssembly::HelixBundleFeatures | virtual |
| FeaturesReporter() | protocols::features::FeaturesReporter | inline |
| find_tag(core::pose::Pose const &pose) const | protocols::features::FeaturesReporter | protected |
| get_helix_fragments(StructureID struct_id, utility::sql_database::sessionOP db_session) | protocols::features::helixAssembly::HelixBundleFeatures | |
| get_helix_pairs(core::pose::Pose const &pose, utility::vector1< HelicalFragmentOP > helix_fragments) | protocols::features::helixAssembly::HelixBundleFeatures | |
| get_relevant_residues_mode() const | protocols::features::FeaturesReporter | |
| helix_cap_dist_cutoff_ | protocols::features::helixAssembly::HelixBundleFeatures | private |
| helix_size_ | protocols::features::helixAssembly::HelixBundleFeatures | private |
| HelixBundleFeatures() | protocols::features::helixAssembly::HelixBundleFeatures | |
| load_into_pose(utility::sql_database::sessionOP, StructureID, core::pose::Pose &) | protocols::features::FeaturesReporter | inlinevirtual |
| max_degrees_off_parallel_ | protocols::features::helixAssembly::HelixBundleFeatures | private |
| min_interacting_set_fraction_ | protocols::features::helixAssembly::HelixBundleFeatures | private |
| min_per_residue_fa_attr_ | protocols::features::helixAssembly::HelixBundleFeatures | private |
| overlapping(HelicalFragmentOP const &fragment_1, HelicalFragmentOP const &fragment_2) | protocols::features::helixAssembly::HelixBundleFeatures | |
| parse_my_tag(utility::tag::TagCOP tag, basic::datacache::DataMap &data, protocols::filters::Filters_map const &, protocols::moves::Movers_map const &, core::pose::Pose const &pose) | protocols::features::helixAssembly::HelixBundleFeatures | virtual |
| record_helix_sasas(core::pose::Pose const &pose, std::set< HelicalFragmentOP > const &frag_set) | protocols::features::helixAssembly::HelixBundleFeatures | |
| relevant_residues_mode_ | protocols::features::FeaturesReporter | protected |
| report_features(core::pose::Pose const &pose, utility::vector1< bool > const &relevant_residues, StructureID struct_id, utility::sql_database::sessionOP db_session) | protocols::features::helixAssembly::HelixBundleFeatures | virtual |
| protocols::features::FeaturesReporter::report_features(core::pose::Pose const &, StructureID, utility::sql_database::sessionOP) | protocols::features::FeaturesReporter | |
| sasa_filter_ | protocols::features::helixAssembly::HelixBundleFeatures | private |
| schema() const | protocols::features::FeaturesReporter | inlinevirtual |
| scorefxn_ | protocols::features::helixAssembly::HelixBundleFeatures | private |
| set_relevant_residues_mode(RelevantResiduesMode::T setting) | protocols::features::FeaturesReporter | |
| type_name() const | protocols::features::helixAssembly::HelixBundleFeatures | inlinevirtual |
| write_schema_to_db(utility::sql_database::sessionOP db_session) const | protocols::features::helixAssembly::HelixBundleFeatures | virtual |
| ~FeaturesReporter() | protocols::features::FeaturesReporter | virtual |
1.8.7