protocols::rotamer_recovery::RRComparerChiDiff Class Reference

#include <RRComparer.hh>

Public Member Functions
	RRComparerChiDiff ()
	~RRComparerChiDiff ()
	RRComparerChiDiff (RRComparerChiDiff const &)
virtual void	set_recovery_threshold (core::Real const setting)
virtual void	set_max_chi_considered (core::Size const max_chi)
virtual std::string	get_name () const
virtual std::string	get_parameters () const
virtual bool	measure_rotamer_recovery (core::pose::Pose const &pose1, core::pose::Pose const &pose2, core::conformation::Residue const &res1, core::conformation::Residue const &res2, core::Real &score, bool &recovered)
Public Member Functions inherited from protocols::rotamer_recovery::RRComparer
virtual	~RRComparer ()
	Automatically generated virtual destructor for class deriving directly from ReferenceCount. More...

Private Attributes
core::Real	tolerance_
bool	limit_chi_angles_
core::Size	max_chi_considered_

Constructor & Destructor Documentation

protocols::rotamer_recovery::RRComparerChiDiff::RRComparerChiDiff

(

)

protocols::rotamer_recovery::RRComparerChiDiff::~RRComparerChiDiff

(

)

protocols::rotamer_recovery::RRComparerChiDiff::RRComparerChiDiff

(

RRComparerChiDiff const &

src

)

Member Function Documentation

string protocols::rotamer_recovery::RRComparerChiDiff::get_name ( ) const

virtual

Implements protocols::rotamer_recovery::RRComparer.

string protocols::rotamer_recovery::RRComparerChiDiff::get_parameters ( ) const

virtual

Implements protocols::rotamer_recovery::RRComparer.

bool protocols::rotamer_recovery::RRComparerChiDiff::measure_rotamer_recovery ( core::pose::Pose const &  pose1, core::pose::Pose const &  pose2, core::conformation::Residue const &  res1, core::conformation::Residue const &  res2, core::Real &  score, bool &  recovered  )

virtual

measure the rotamer recovery by comparing rotamer bins

Returns

true, if the measurement was successful, false otherwise

Implements protocols::rotamer_recovery::RRComparer.

References core::conformation::Residue::aa(), core::conformation::Residue::chi(), core::chemical::ResidueType::chi_2_proton_chi(), limit_chi_angles_, max_chi_considered_, core::conformation::Residue::name(), core::chemical::ResidueType::name(), core::conformation::Residue::nchi(), num_canonical_aas, core::pack::dunbrack::subtract_chi_angles(), subtract_chi_angles(), tolerance_, protocols::rotamer_recovery::TR, core::conformation::Residue::type(), and utility_exit.

void protocols::rotamer_recovery::RRComparerChiDiff::set_max_chi_considered ( core::Size const  max_chi )

virtual

References limit_chi_angles_, and max_chi_considered_.

void protocols::rotamer_recovery::RRComparerChiDiff::set_recovery_threshold ( core::Real const  setting )

virtual

Implements protocols::rotamer_recovery::RRComparer.

References tolerance_.

Member Data Documentation

bool protocols::rotamer_recovery::RRComparerChiDiff::limit_chi_angles_

private

Referenced by measure_rotamer_recovery(), and set_max_chi_considered().

core::Size protocols::rotamer_recovery::RRComparerChiDiff::max_chi_considered_

private

Referenced by measure_rotamer_recovery(), and set_max_chi_considered().

core::Real protocols::rotamer_recovery::RRComparerChiDiff::tolerance_

private

Referenced by measure_rotamer_recovery(), and set_recovery_threshold().

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The documentation for this class was generated from the following files:

• symlinks/rosetta/src/protocols/rotamer_recovery/RRComparer.hh
• symlinks/rosetta/src/protocols/rotamer_recovery/RRComparer.cc