protocols::flexpack::interaction_graph::FlexbbNode Member List

This is the complete list of members for protocols::flexpack::interaction_graph::FlexbbNode, including all inherited members.

add_to_one_body_energies(ObjexxFCL::FArray1< PackerEnergy > &energies)	protocols::flexpack::interaction_graph::FlexbbNode	virtual
add_to_one_body_energy(int state, PackerEnergy energy)	protocols::flexpack::interaction_graph::FlexbbNode	virtual
alt_bb() const	protocols::flexpack::interaction_graph::FlexbbNode	inline
alternate_state() const	protocols::flexpack::interaction_graph::FlexbbNode	inline
alternate_state_	protocols::flexpack::interaction_graph::FlexbbNode	private
alternate_state_info() const	protocols::flexpack::interaction_graph::FlexbbNode	inline
alternate_state_info_	protocols::flexpack::interaction_graph::FlexbbNode	private
alternate_state_is_being_considered() const	protocols::flexpack::interaction_graph::FlexbbNode	inline
alternate_state_is_being_considered_	protocols::flexpack::interaction_graph::FlexbbNode	private
alternate_state_one_body_energy() const	protocols::flexpack::interaction_graph::FlexbbNode	inline
alternate_state_one_body_energy_	protocols::flexpack::interaction_graph::FlexbbNode	private
alternate_state_total_energy() const	protocols::flexpack::interaction_graph::FlexbbNode	inline
alternate_state_total_energy_	protocols::flexpack::interaction_graph::FlexbbNode	private
alternate_state_two_body_energies() const	protocols::flexpack::interaction_graph::FlexbbNode	inline
alternate_state_two_body_energies(int ind) const	protocols::flexpack::interaction_graph::FlexbbNode	inline
alternate_state_two_body_energies_	protocols::flexpack::interaction_graph::FlexbbNode	private
closest_state_on_alt_bb() const	protocols::flexpack::interaction_graph::FlexbbNode	inline
closest_state_on_alt_bb_	protocols::flexpack::interaction_graph::FlexbbNode	private
copy_alternate_to_current()	protocols::flexpack::interaction_graph::FlexbbNode	protected
count_dynamic_memory() const	protocols::flexpack::interaction_graph::FlexbbNode	virtual
count_energy_to_node_in_my_fragtotalE(int edge_index) const	protocols::flexpack::interaction_graph::FlexbbNode	inline
curr_bb() const	protocols::flexpack::interaction_graph::FlexbbNode	inline
curr_state_one_body_energy() const	protocols::flexpack::interaction_graph::FlexbbNode	inline
curr_state_one_body_energy_	protocols::flexpack::interaction_graph::FlexbbNode	private
curr_state_total_energy() const	protocols::flexpack::interaction_graph::FlexbbNode	inline
curr_state_total_energy_	protocols::flexpack::interaction_graph::FlexbbNode	private
curr_state_two_body_energies()	protocols::flexpack::interaction_graph::FlexbbNode	inline
curr_state_two_body_energies_	protocols::flexpack::interaction_graph::FlexbbNode	private
current_state() const	protocols::flexpack::interaction_graph::FlexbbNode	inline
current_state_	protocols::flexpack::interaction_graph::FlexbbNode	private
current_state_info() const	protocols::flexpack::interaction_graph::FlexbbNode	inline
current_state_info_	protocols::flexpack::interaction_graph::FlexbbNode	private
edge_connects_flexsegmate() const	protocols::flexpack::interaction_graph::FlexbbNode	inline
edge_connects_flexsegmate_	protocols::flexpack::interaction_graph::FlexbbNode	private
FlexbbNode(FlexbbInteractionGraph *owner, int node_id, int num_states)	protocols::flexpack::interaction_graph::FlexbbNode
FlexbbNode()	protocols::flexpack::interaction_graph::FlexbbNode	private
FlexbbNode(FlexbbNode const &)	protocols::flexpack::interaction_graph::FlexbbNode	private
get_adjacent_flexbb_node(int index) const	protocols::flexpack::interaction_graph::FlexbbNode	inlineprotected
get_adjacent_flexbb_node(int index)	protocols::flexpack::interaction_graph::FlexbbNode	inlineprotected
get_all_states(utility::vector1< Size > &rotlist, int offset) const	protocols::flexpack::interaction_graph::FlexbbNode
get_backbone_for_current_state() const	protocols::flexpack::interaction_graph::FlexbbNode
get_bb_for_state(int state) const	protocols::flexpack::interaction_graph::FlexbbNode	inline
get_current_state() const	protocols::flexpack::interaction_graph::FlexbbNode
get_flexbbig_owner() const	protocols::flexpack::interaction_graph::FlexbbNode	inlineprotected
get_flexbbig_owner()	protocols::flexpack::interaction_graph::FlexbbNode	inlineprotected
get_incident_flexbb_edge(int index) const	protocols::flexpack::interaction_graph::FlexbbNode	inlineprotected
get_incident_flexbb_edge(int index)	protocols::flexpack::interaction_graph::FlexbbNode	inlineprotected
get_num_distinct_backbones() const	protocols::flexpack::interaction_graph::FlexbbNode	inline
get_num_states_for_aa_type_for_bb(int aa_type, int bb) const	protocols::flexpack::interaction_graph::FlexbbNode
get_num_states_for_bb(int bbconf) const	protocols::flexpack::interaction_graph::FlexbbNode
get_one_body_energy(int state) const	protocols::flexpack::interaction_graph::FlexbbNode
get_state_offset_for_bb(int bbconf) const	protocols::flexpack::interaction_graph::FlexbbNode
get_states_on_curr_bb(utility::vector1< Size > &state_list, int offset) const	protocols::flexpack::interaction_graph::FlexbbNode
getNumStatesPerAAPerBB(int aa)	protocols::flexpack::interaction_graph::FlexbbNode
have_edges_copy_alternate_to_current()	protocols::flexpack::interaction_graph::FlexbbNode	protected
have_edges_copy_alternate_to_current_following_flexbb_accept()	protocols::flexpack::interaction_graph::FlexbbNode	protected
inc_alternate_state_total_energy(PackerEnergy setting)	protocols::flexpack::interaction_graph::FlexbbNode	inlineprotected
inc_curr_state_total_energy(PackerEnergy setting)	protocols::flexpack::interaction_graph::FlexbbNode	inlineprotected
inform_edges_considered_fixedbb_substition_uncommitted()	protocols::flexpack::interaction_graph::FlexbbNode	protected
inform_edges_of_alt_state_before_bbjump()	protocols::flexpack::interaction_graph::FlexbbNode
inform_incident_edges_about_partial_state_assignment()	protocols::flexpack::interaction_graph::FlexbbNode	protected
num_aa_types() const	protocols::flexpack::interaction_graph::FlexbbNode	inline
num_aa_types_	protocols::flexpack::interaction_graph::FlexbbNode	private
num_bb_	protocols::flexpack::interaction_graph::FlexbbNode	private
num_bbconfs() const	protocols::flexpack::interaction_graph::FlexbbNode	inline
num_states_for_aa_for_bb()	protocols::flexpack::interaction_graph::FlexbbNode	inline
num_states_for_aa_for_bb_	protocols::flexpack::interaction_graph::FlexbbNode	private
num_states_for_bb()	protocols::flexpack::interaction_graph::FlexbbNode	inline
num_states_for_bb_	protocols::flexpack::interaction_graph::FlexbbNode	private
one_body_energies() const	protocols::flexpack::interaction_graph::FlexbbNode	inline
one_body_energies_	protocols::flexpack::interaction_graph::FlexbbNode	private
PackerEnergy typedef	protocols::flexpack::interaction_graph::FlexbbNode
parent typedef	protocols::flexpack::interaction_graph::FlexbbNode
partial_state_assignment(int new_state)	protocols::flexpack::interaction_graph::FlexbbNode	protected
prepare_for_simulated_annealing()	protocols::flexpack::interaction_graph::FlexbbNode	virtual
print() const	protocols::flexpack::interaction_graph::FlexbbNode	virtual
print_internal_energies()	protocols::flexpack::interaction_graph::FlexbbNode
reset_all_rotamer_substitution_bookkeeping_data()	protocols::flexpack::interaction_graph::FlexbbNode	protected
set_alternate_state(int setting)	protocols::flexpack::interaction_graph::FlexbbNode	inlineprotected
set_alternate_state_one_body_energy(PackerEnergy setting)	protocols::flexpack::interaction_graph::FlexbbNode	inlineprotected
set_alternate_state_total_energy(PackerEnergy setting)	protocols::flexpack::interaction_graph::FlexbbNode	inlineprotected
set_alternate_state_two_body_energies(Size index, PackerEnergy setting)	protocols::flexpack::interaction_graph::FlexbbNode	inlineprotected
set_amino_acid_types(utility::vector1< int > const &)	protocols::flexpack::interaction_graph::FlexbbNode
set_closest_states_on_other_bbs(ObjexxFCL::FArray2D_int const &)	protocols::flexpack::interaction_graph::FlexbbNode
set_considering_alternate_state()	protocols::flexpack::interaction_graph::FlexbbNode	inlineprotected
set_curr_state_one_body_energy(PackerEnergy setting)	protocols::flexpack::interaction_graph::FlexbbNode	inlineprotected
set_curr_state_total_energy(PackerEnergy setting)	protocols::flexpack::interaction_graph::FlexbbNode	inlineprotected
set_curr_state_two_body_energies(Size index, PackerEnergy setting)	protocols::flexpack::interaction_graph::FlexbbNode	inlineprotected
set_current_state(int setting)	protocols::flexpack::interaction_graph::FlexbbNode	inlineprotected
set_num_distinct_backbones(int nbbconfs)	protocols::flexpack::interaction_graph::FlexbbNode
set_num_states_per_backbone(utility::vector1< int > const &)	protocols::flexpack::interaction_graph::FlexbbNode
Size typedef	protocols::flexpack::interaction_graph::FlexbbNode
state_has_same_backbone_as_current(int state) const	protocols::flexpack::interaction_graph::FlexbbNode	inline
state_info(int state) const	protocols::flexpack::interaction_graph::FlexbbNode	inline
state_info_	protocols::flexpack::interaction_graph::FlexbbNode	private
state_offsets_for_aa_for_bb()	protocols::flexpack::interaction_graph::FlexbbNode	inline
state_offsets_for_aa_for_bb_	protocols::flexpack::interaction_graph::FlexbbNode	private
state_offsets_for_bb()	protocols::flexpack::interaction_graph::FlexbbNode	inline
state_offsets_for_bb_	protocols::flexpack::interaction_graph::FlexbbNode	private
state_unassigned() const	protocols::flexpack::interaction_graph::FlexbbNode	virtual
update_internal_energy_sums()	protocols::flexpack::interaction_graph::FlexbbNode
update_internal_vectors()	protocols::flexpack::interaction_graph::FlexbbNode	protected
update_one_body_energy(int state, PackerEnergy energy)	protocols::flexpack::interaction_graph::FlexbbNode	virtual
write_current_state_to_state_array(ObjexxFCL::FArray1_int &nodes_states)	protocols::flexpack::interaction_graph::FlexbbNode
zero_one_body_energies()	protocols::flexpack::interaction_graph::FlexbbNode	virtual
~FlexbbNode()	protocols::flexpack::interaction_graph::FlexbbNode	virtual