protocols::genetic_algorithm::DiscreteRandomizer Class Reference

#include <EntityRandomizer.hh>

Public Member Functions
virtual	~DiscreteRandomizer ()
virtual void	add_choice (EntityElementOP const &choice)
virtual void	set_choices (EntityElements const &choices)
virtual void	mutate (Entity &entity)
virtual core::Size	library_size () const
virtual EntityElements const &	choices () const
Public Member Functions inherited from protocols::genetic_algorithm::EntityRandomizer
	EntityRandomizer ()
virtual	~EntityRandomizer ()
virtual EntityOP	random_entity ()
virtual void	crossover (Entity &entity1, Entity &entity2)
	randomly swap [1, N-1] traits between two entities More...
virtual core::Size	entity_length () const
virtual void	set_mutation_rate (core::Real rate)
virtual core::Real	mutation_rate () const
virtual EntityCOP	entity_template () const
virtual void	set_entity_template (EntityCOP entity)

Private Attributes
EntityElements	choices_

Additional Inherited Members
Public Types inherited from protocols::genetic_algorithm::EntityRandomizer
typedef utility::pointer::owning_ptr < EntityRandomizer >	OP
typedef utility::pointer::owning_ptr < EntityRandomizer const >	COP
typedef Entity::OP	EntityOP
typedef Entity::COP	EntityCOP
Protected Member Functions inherited from protocols::genetic_algorithm::EntityRandomizer
virtual void	set_entity_length (core::Size length)

Constructor & Destructor Documentation

protocols::genetic_algorithm::DiscreteRandomizer::~DiscreteRandomizer ( )

virtual

Member Function Documentation

void protocols::genetic_algorithm::DiscreteRandomizer::add_choice ( EntityElementOP const &  choice )

virtual

References choices_.

EntityElements const & protocols::genetic_algorithm::DiscreteRandomizer::choices ( ) const

virtual

References choices_.

Referenced by set_choices().

core::Size protocols::genetic_algorithm::DiscreteRandomizer::library_size ( ) const

virtual

Implements protocols::genetic_algorithm::EntityRandomizer.

References choices_, protocols::genetic_algorithm::EntityRandomizer::entity_length(), and size().

void protocols::genetic_algorithm::DiscreteRandomizer::mutate ( Entity &  entity )

virtual

Implements protocols::genetic_algorithm::EntityRandomizer.

References choices_, end, protocols::genetic_algorithm::EntityRandomizer::mutation_rate(), protocols::genetic_algorithm::Entity::set_traits(), protocols::genetic_algorithm::Entity::traits(), and numeric::random::uniform().

void protocols::genetic_algorithm::DiscreteRandomizer::set_choices ( EntityElements const &  choices )

virtual

References choices(), and choices_.

Member Data Documentation

EntityElements protocols::genetic_algorithm::DiscreteRandomizer::choices_

private

Referenced by add_choice(), choices(), library_size(), mutate(), and set_choices().

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The documentation for this class was generated from the following files:

• symlinks/rosetta/src/protocols/genetic_algorithm/EntityRandomizer.hh
• symlinks/rosetta/src/protocols/genetic_algorithm/EntityRandomizer.cc