StepWiseRNA_Classes.hh File Reference

#include <core/pose/Pose.fwd.hh>
#include <numeric/xyzMatrix.hh>
#include <numeric/xyzVector.hh>
#include <core/id/TorsionID.hh>
#include <core/types.hh>
#include <core/scoring/ScoreFunction.fwd.hh>
#include <core/io/silent/SilentFileData.fwd.hh>
#include <utility/vector1.hh>
#include <protocols/moves/Mover.hh>
#include <string>
#include <map>
#include <utility/exit.hh>

Classes
class	protocols::stepwise::sampling::rna::Jump_point
struct	protocols::stepwise::sampling::rna::Torsion_Info
struct	protocols::stepwise::sampling::rna::output_data_struct
class	protocols::stepwise::sampling::rna::InternalWorkingResidueParameter
class	protocols::stepwise::sampling::rna::StepWiseRNA_CountStruct

Namespaces
	protocols
	The instance of Loops contained by AbrelaxApplication should be replaced by a LoopsOP.
	protocols::stepwise
	protocols::stepwise::sampling
	protocols::stepwise::sampling::rna

Macros
#define	O3I_C5I_PLUS_TWO_MAX_DIST   11.4226
#define	O3I_C5I_PLUS_ONE_MAX_DIST   3.968000
#define	O3I_O3I_PLUS_ONE_MAX_DIST   7.45583
#define	C5I_C5I_PLUS_ONE_MAX_DIST   7.71355
#define	O3I_C5I_MIN_DIST   2.000
#define	O3I_C5I_MAX_DIST   4.627
#define	GAP_SIZE_DUMMY   999

Typedefs
typedef numeric::xyzMatrix < core::Real >	Matrix

Detailed Description

Detailed:

Author

Rhiju Das

Macro Definition Documentation

#define C5I_C5I_PLUS_ONE_MAX_DIST   7.71355

Referenced by protocols::stepwise::sampling::rna::get_possible_O3prime_C5prime_distance_range().

#define GAP_SIZE_DUMMY   999

Referenced by protocols::stepwise::sampling::rna::add_fade_chain_break_constraint_across_gap(), protocols::stepwise::sampling::rna::legacy::StepWiseRNA_JobParametersSetup::figure_out_gap_size_and_five_prime_chain_break_res(), and protocols::stepwise::sampling::rna::StepWiseRNA_JobParameters::gap_size_to_anchor().

#define O3I_C5I_MAX_DIST   4.627

Referenced by protocols::stepwise::sampling::rna::get_possible_O3prime_C5prime_distance_range().

#define O3I_C5I_MIN_DIST   2.000

Referenced by protocols::stepwise::sampling::rna::get_possible_O3prime_C5prime_distance_range().

#define O3I_C5I_PLUS_ONE_MAX_DIST   3.968000

Referenced by protocols::stepwise::sampling::rna::rigid_body::initialize_xyz_parameters().

#define O3I_C5I_PLUS_TWO_MAX_DIST   11.4226

Referenced by protocols::stepwise::sampling::rna::get_possible_O3prime_C5prime_distance_range(), and protocols::stepwise::sampling::rna::rigid_body::initialize_xyz_parameters().

#define O3I_O3I_PLUS_ONE_MAX_DIST   7.45583

Typedef Documentation

typedef numeric::xyzMatrix< core::Real > Matrix