RNA_StructureParameters.cc File Reference

#include <protocols/farna/RNA_StructureParameters.hh>
#include <protocols/farna/RNA_JumpLibrary.hh>
#include <protocols/farna/RNA_ProtocolUtil.hh>
#include <protocols/farna/RNA_SecStructInfo.hh>
#include <protocols/toolbox/AllowInsert.hh>
#include <core/scoring/rna/RNA_ScoringInfo.hh>
#include <core/scoring/rna/RNA_DataInfo.hh>
#include <core/pose/Pose.hh>
#include <core/pose/util.hh>
#include <core/pose/rna/RNA_Util.hh>
#include <core/chemical/ResidueTypeSet.hh>
#include <core/conformation/Residue.hh>
#include <core/conformation/ResidueFactory.hh>
#include <core/id/TorsionID.hh>
#include <core/kinematics/FoldTree.hh>
#include <core/kinematics/AtomTree.hh>
#include <core/chemical/rna/RNA_Util.hh>
#include <core/scoring/rna/RNA_LowResolutionPotential.hh>
#include <core/scoring/ScoreType.hh>
#include <core/scoring/constraints/ConstraintSet.fwd.hh>
#include <core/id/AtomID.hh>
#include <core/id/NamedAtomID.hh>
#include <ObjexxFCL/FArray1D.hh>
#include <ObjexxFCL/FArray2D.hh>
#include <ObjexxFCL/format.hh>
#include <utility/io/izstream.hh>
#include <utility/exit.hh>
#include <utility/tools/make_vector1.hh>
#include <numeric/random/random.hh>
#include <core/types.hh>
#include <basic/Tracer.hh>
#include <fstream>
#include <iostream>
#include <list>
#include <core/chemical/VariantType.hh>
#include <utility/vector1.hh>
#include <core/kinematics/tree/Atom.hh>

Namespaces
	ObjexxFCL
	Application level code for relax-type protocols.
	ObjexxFCL::format
	protocols
	The instance of Loops contained by AbrelaxApplication should be replaced by a LoopsOP.
	protocols::farna

Functions
bool	protocols::farna::in_list (Size const &pos, utility::vector1< Size > const &res_list)

Variables
static numeric::random::RandomGenerator	protocols::farna::RG (144620)
static basic::Tracer	protocols::farna::tr ("protocols.rna.RNA_StructureParameters")