protocols::rotamer_sampler::rna::RNA_McSuite Member List

This is the complete list of members for protocols::rotamer_sampler::rna::RNA_McSuite, including all inherited members.

a_form_range_	protocols::rotamer_sampler::rna::RNA_McSuite	private
a_form_torsions_	protocols::rotamer_sampler::rna::RNA_McSuite	private
add_rotamer(McRotamerOP const &rotamer)	protocols::rotamer_sampler::McComb	inlinevirtual
apply(core::pose::Pose &pose)	protocols::rotamer_sampler::McComb	virtual
protocols::moves::Mover::apply(core::io::serialization::PipeMap &pmap)	protocols::moves::Mover	virtual
bb_samplers_	protocols::rotamer_sampler::rna::RNA_McSuite	private
chi_samplers_	protocols::rotamer_sampler::rna::RNA_McSuite	private
clear_info()	protocols::moves::Mover	inlinevirtual
clear_rotamer()	protocols::rotamer_sampler::rna::RNA_McSuite	virtual
clone() const	protocols::moves::Mover	virtual
create()	protocols::moves::Mover	virtual
Filters_map typedef	protocols::moves::Mover
fresh_instance() const	protocols::moves::Mover	virtual
gaussian_stdev_	protocols::rotamer_sampler::rna::RNA_McSuite	private
get_additional_output()	protocols::moves::Mover	virtual
get_current_job() const	protocols::moves::Mover
get_current_tag() const	protocols::moves::Mover	inline
get_input_pose() const	protocols::moves::Mover
get_last_move_status() const	protocols::moves::Mover
get_name() const	protocols::rotamer_sampler::rna::RNA_McSuite	inlinevirtual
get_native_pose() const	protocols::moves::Mover
get_type() const	protocols::moves::Mover	inline
idealize_coord_	protocols::rotamer_sampler::rna::RNA_McSuite	private
info()	protocols::moves::Mover	inlinevirtual
info() const	protocols::moves::Mover	inlinevirtual
init()	protocols::rotamer_sampler::rna::RNA_McSuite	virtual
init_pucker_	protocols::rotamer_sampler::rna::RNA_McSuite	private
init_torsions_	protocols::rotamer_sampler::rna::RNA_McSuite	private
is_init() const	protocols::rotamer_sampler::RotamerBase	inlineprotected
last_proposal_density_ratio()	protocols::moves::Mover	inlinevirtual
McComb()	protocols::rotamer_sampler::McComb
McRotamer()	protocols::rotamer_sampler::McRotamer	inline
Mover()	protocols::moves::Mover
Mover(std::string const &type_name)	protocols::moves::Mover
Mover(Mover const &other)	protocols::moves::Mover
name()	protocols::moves::Mover	inlinestatic
not_end() const	protocols::rotamer_sampler::RotamerBase	inlinevirtual
operator++()	protocols::rotamer_sampler::McComb	virtual
operator=(Mover const &other)	protocols::moves::Mover
parse_def(utility::lua::LuaObject const &def, utility::lua::LuaObject const &score_fxns, utility::lua::LuaObject const &tasks, MoverCacheSP cache)	protocols::moves::Mover	virtual
parse_my_tag(TagCOP tag, basic::datacache::DataMap &data, Filters_map const &filters, Movers_map const &movers, Pose const &pose)	protocols::moves::Mover	virtual
parse_state(SerializableState const &state)	protocols::moves::Mover	virtual
Pose typedef	protocols::moves::Mover
PoseCOP typedef	protocols::moves::Mover
pucker_flip_rate_	protocols::rotamer_sampler::rna::RNA_McSuite	private
random() const	protocols::rotamer_sampler::RotamerBase	inlinevirtual
register_options()	protocols::moves::Mover	inlinestatic
reinitialize_for_each_job() const	protocols::moves::Mover	virtual
reinitialize_for_new_input() const	protocols::moves::Mover	virtual
reset()	protocols::rotamer_sampler::McComb	virtual
reset_status()	protocols::moves::Mover
RNA_McSuite(core::Size const rsd_id)	protocols::rotamer_sampler::rna::RNA_McSuite
RotamerBase()	protocols::rotamer_sampler::RotamerBase	inline
rsd_id_	protocols::rotamer_sampler::rna::RNA_McSuite	private
sample_bb_	protocols::rotamer_sampler::rna::RNA_McSuite	private
sample_lower_nucleoside_	protocols::rotamer_sampler::rna::RNA_McSuite	private
sample_near_a_form_	protocols::rotamer_sampler::rna::RNA_McSuite	private
sample_upper_nucleoside_	protocols::rotamer_sampler::rna::RNA_McSuite	private
save_state(SerializableState &state)	protocols::moves::Mover	virtual
set_and_reinit(T &params, T const &setting)	protocols::rotamer_sampler::RotamerBase	inlineprotected
set_current_job(protocols::jobdist::BasicJobCOP job)	protocols::moves::Mover
set_current_tag(std::string const &new_tag)	protocols::moves::Mover	inline
set_gaussian_stdev(core::Real const setting)	protocols::rotamer_sampler::rna::RNA_McSuite
set_idealize_coord(bool const setting)	protocols::rotamer_sampler::rna::RNA_McSuite	inline
set_init(bool const setting)	protocols::rotamer_sampler::RotamerBase	inlineprotected
set_init_from_pose(core::pose::Pose const &pose)	protocols::rotamer_sampler::rna::RNA_McSuite
set_init_states(utility::vector1< core::Real > const &init_torsions, core::chemical::rna::PuckerState const init_pucker)	protocols::rotamer_sampler::rna::RNA_McSuite	inline
set_input_pose(PoseCOP pose)	protocols::moves::Mover	virtual
set_last_move_status(MoverStatus status)	protocols::moves::Mover	protected
set_native_pose(PoseCOP pose)	protocols::moves::Mover	virtual
set_pucker_flip_rate(core::Real const setting)	protocols::rotamer_sampler::rna::RNA_McSuite
set_random(bool const setting)	protocols::rotamer_sampler::RotamerBase	inlinevirtual
set_sample_bb(bool const setting)	protocols::rotamer_sampler::rna::RNA_McSuite	inline
set_sample_lower_nucleoside(bool const setting)	protocols::rotamer_sampler::rna::RNA_McSuite	inline
set_sample_near_a_form(bool const setting)	protocols::rotamer_sampler::rna::RNA_McSuite	inline
set_sample_upper_nucleoside(bool const setting)	protocols::rotamer_sampler::rna::RNA_McSuite	inline
set_skip_same_pucker(bool const setting)	protocols::rotamer_sampler::rna::RNA_McSuite	inline
set_uniform_sampling(bool const setting)	protocols::rotamer_sampler::McComb	virtual
show(std::ostream &output=std::cout) const	protocols::moves::Mover	virtual
skip_same_pucker_	protocols::rotamer_sampler::rna::RNA_McSuite	private
Strings typedef	protocols::moves::Mover
sugar_samplers_	protocols::rotamer_sampler::rna::RNA_McSuite	private
TagCOP typedef	protocols::moves::Mover
test_move(Pose &pose)	protocols::moves::Mover	inlinevirtual
torsion_ids_	protocols::rotamer_sampler::rna::RNA_McSuite	private
TorsionList typedef	protocols::rotamer_sampler::RotamerBase
type() const	protocols::rotamer_sampler::rna::RNA_McSuite	inlinevirtual
protocols::moves::Mover::type(const std::string &type_in)	protocols::moves::Mover	inline
uniform_sampling() const	protocols::rotamer_sampler::McRotamer	inlinevirtual
update()	protocols::rotamer_sampler::McComb	virtual
~McComb()	protocols::rotamer_sampler::McComb	inlinevirtual
~McRotamer()	protocols::rotamer_sampler::McRotamer	inlinevirtual
~Mover()	protocols::moves::Mover	virtual
~RotamerBase()	protocols::rotamer_sampler::RotamerBase	inlinevirtual