GraftCDRLoopsProtocol.cc File Reference

Build a homology model of an antibody. More...

#include <core/io/pdb/pose_io.hh>
#include <core/pose/util.hh>
#include <core/pose/PDBInfo.hh>
#include <core/pack/task/TaskFactory.hh>
#include <core/scoring/Energies.hh>
#include <core/scoring/ScoreType.hh>
#include <core/scoring/ScoreFunctionFactory.hh>
#include <core/import_pose/import_pose.hh>
#include <basic/prof.hh>
#include <basic/Tracer.hh>
#include <basic/options/option.hh>
#include <basic/options/keys/antibody.OptionKeys.gen.hh>
#include <basic/options/keys/constraints.OptionKeys.gen.hh>
#include <basic/options/keys/in.OptionKeys.gen.hh>
#include <basic/options/keys/out.OptionKeys.gen.hh>
#include <basic/options/keys/run.OptionKeys.gen.hh>
#include <protocols/jd2/JobDistributor.hh>
#include <protocols/jd2/Job.hh>
#include <protocols/jd2/JobOutputter.hh>
#include <protocols/loops/loops_main.hh>
#include <protocols/simple_moves/RotamerTrialsMinMover.hh>
#include <protocols/docking/SidechainMinMover.hh>
#include <protocols/moves/MoverContainer.hh>
#include <protocols/antibody/GraftOneCDRLoop.hh>
#include <protocols/antibody/CloseOneCDRLoop.hh>
#include <protocols/antibody/AntibodyInfo.hh>
#include <protocols/antibody/Ab_TemplateInfo.hh>
#include <protocols/antibody/GraftCDRLoopsProtocol.hh>
#include <protocols/antibody/util.hh>
#include <protocols/antibody/CDRsMinPackMin.hh>
#include <protocols/antibody/GraftedStemOptimizer.hh>
#include <ObjexxFCL/format.hh>
#include <ObjexxFCL/string.functions.hh>

Namespaces
	protocols
	The instance of Loops contained by AbrelaxApplication should be replaced by a LoopsOP.
	protocols::antibody

Functions
std::ostream &	protocols::antibody::operator<< (std::ostream &out, const GraftCDRLoopsProtocol &ab_m_2)

Variables
static basic::Tracer	TR ("protocols.antibody.GraftCDRLoopsProtocol")

Detailed Description

Build a homology model of an antibody.

Detailed:

Author

Jianqing Xu ( xubes.nosp@m.t@gm.nosp@m.ail.c.nosp@m.om )

Variable Documentation

basic::Tracer TR("protocols.antibody.GraftCDRLoopsProtocol")

static