represents a single pool used by quota selector More...

#include <TorsionBinPool.hh>

Public Member Functions
	TorsionBinPool (Size size, std::string pool_name, core::fragment::SecondaryStructureOP prediction)
	Creates a pool of a given size and name. More...

virtual	~TorsionBinPool ()

void	show_availability (std::ostream &) const
	prints information on which fragments can be accepted by this pool and how many of them More...

bool	try_fragment (ScoredCandidate &candidate)
	try to insert a given fragment candidate into this pool More...

void	restart (Size, Size)

Public Member Functions inherited from protocols::frag_picker::quota::QuotaPool
	QuotaPool (std::string pool_name, Real quota_fraction)
	Creates a pool of a given size and name. More...

virtual	~QuotaPool ()

virtual bool	could_be_accepted (ScoredCandidate) const =0

virtual Size	total_size () const =0
	Says how many fragments (in total) may fit into this pool. More...

virtual Size	current_size () const =0
	Says how many fragments are currently in this pool. More...

virtual Size	size_left () const =0
	Says how many fragments can still be inserted into this pool. More...

virtual void	clear ()=0
	Makes the pool empty by removing all candidates. More...

virtual void	push (ScoredCandidate)=0
	Push a fragment candidate into the pool container. More...

virtual Size	count_candidates () const =0
	Check how many candidates have been already collected for a given position. More...

std::string const &	get_pool_name () const
	returns the name assigned to this quota pool More...

Real	get_fraction () const
	returns the fraction of this quota pool in the entire population of fragments More...

virtual void	set_fraction (Real new_fraction)
	Sets the fraction of this quota pool in the entire population of fragments. More...

virtual Real	quota_score (ScoredCandidate candidate) const
	provides the score for a candidate that was used to sort a quota pool More...

Public Member Functions inherited from protocols::frag_picker::CandidatesCollector
virtual bool	add (ScoredCandidate)=0
	Insert a fragment candidate to the container. More...

virtual void	insert (Size, CandidatesCollectorOP)=0
	inserts candidates from another collector Candidates may or may not get inserted depending on the candidate and type of storage More...

virtual Size	count_candidates (Size) const =0
	Check how many candidates have been already collected for a given position. More...

virtual Size	query_length () const =0
	Check the size of query sequence that this object knows. This is mainly to be ale to check if it is the same as in the other parts of fragment picking machinery. More...

virtual ScoredCandidatesVector1 &	get_candidates (Size position_in_query)=0

virtual void	print_report (std::ostream &output, scores::FragmentScoreManagerOP scoring) const =0
	Describes what has been collected. More...

Private Member Functions
Size	round (Real x)

Private Attributes
core::fragment::SecondaryStructureOP	prediction_

Size	nh_

Size	ne_

Size	nl_

Size	max_h_

Size	max_l_

Size	max_e_

Size	frag_size_

Detailed Description

represents a single pool used by quota selector

Constructor & Destructor Documentation

protocols::frag_picker::quota::TorsionBinPool::TorsionBinPool	(	Size	size,
		std::string	pool_name,
		core::fragment::SecondaryStructureOP	prediction
	)

inline

Creates a pool of a given size and name.

Parameters

size	- how many fragments may fit into this pool
name	- name assigned to this pool. This in general may be any string that later allows one control pool's behavior from a flag file

References prediction_.

virtual protocols::frag_picker::quota::TorsionBinPool::~TorsionBinPool ( )

virtual