protocols::loop_modeling::loggers Namespace Reference

Classes for informally monitoring loop modeling simulations. More...

Classes
class	Logger
	Base class for logging information about the loop modeling run. More...
class	PdbLogger
	Record snapshots of the simulation in the PDB format. More...
class	ProgressBar
	Display a progress bar that updates after each iteration. More...
class	ScoreVsRmsd
	Report scores and RMSDs for every conformation that gets sampled. More...

Typedefs
typedef utility::pointer::owning_ptr < Logger >	LoggerOP
typedef utility::pointer::owning_ptr < Logger const >	LoggerCOP
typedef utility::vector1 < LoggerOP >	LoggerList
typedef utility::pointer::owning_ptr < PdbLogger >	PdbLoggerOP
typedef utility::pointer::owning_ptr < PdbLogger const >	PdbLoggerCOP
typedef utility::pointer::owning_ptr < ProgressBar >	ProgressBarOP
typedef utility::pointer::owning_ptr < ProgressBar const >	ProgressBarCOP
typedef utility::pointer::owning_ptr < ScoreVsRmsd >	ScoreVsRmsdOP
typedef utility::pointer::owning_ptr < ScoreVsRmsd const >	ScoreVsRmsdCOP
typedef std::map< Real, Real >	ScoreToRmsdMap

Variables
static basic::Tracer	TR ("protocols.loop_modeling.loggers.ProgressBar")

Detailed Description

Classes for informally monitoring loop modeling simulations.

Most of the classes in this namespace just keep track of simple statistics regarding the loop modeling simulation and report them to stdout. This information is more intended for debugging and diagnostic purposes than it is for analysis. If you are interested in recording information to be be used for analysis, consider the FeaturesReporter framework.

Typedef Documentation

typedef utility::pointer::owning_ptr<Logger const> protocols::loop_modeling::loggers::LoggerCOP

typedef utility::vector1<LoggerOP> protocols::loop_modeling::loggers::LoggerList

typedef utility::pointer::owning_ptr<Logger> protocols::loop_modeling::loggers::LoggerOP

typedef utility::pointer::owning_ptr<PdbLogger const> protocols::loop_modeling::loggers::PdbLoggerCOP

typedef utility::pointer::owning_ptr<PdbLogger> protocols::loop_modeling::loggers::PdbLoggerOP

typedef utility::pointer::owning_ptr<ProgressBar const> protocols::loop_modeling::loggers::ProgressBarCOP

typedef utility::pointer::owning_ptr<ProgressBar> protocols::loop_modeling::loggers::ProgressBarOP

typedef std::map<Real, Real> protocols::loop_modeling::loggers::ScoreToRmsdMap

typedef utility::pointer::owning_ptr<ScoreVsRmsd const> protocols::loop_modeling::loggers::ScoreVsRmsdCOP

typedef utility::pointer::owning_ptr<ScoreVsRmsd> protocols::loop_modeling::loggers::ScoreVsRmsdOP

Variable Documentation

basic::Tracer protocols::loop_modeling::loggers::TR("protocols.loop_modeling.loggers.ProgressBar")

static

Referenced by protocols::loop_modeling::loggers::ProgressBar::log_iteration_().