protocols::farna::BasePairStep Class Reference

#include <BasePairStep.hh>

Public Member Functions
	BasePairStep (Size const i, Size const i_next, Size const j, Size const j_next)
	~BasePairStep ()
Size const &	i () const
Size const &	i_next () const
Size const &	j () const
Size const &	j_next () const

Private Types
typedef std::pair< Size, Size >	DinucleotideStrand

Private Attributes
std::pair< DinucleotideStrand, DinucleotideStrand >	base_pair_step_

Friends
std::ostream &	operator<< (std::ostream &os, BasePairStep const &bps)

Member Typedef Documentation

typedef std::pair< Size, Size > protocols::farna::BasePairStep::DinucleotideStrand

private

Constructor & Destructor Documentation

protocols::farna::BasePairStep::BasePairStep	(	Size const	i,
		Size const	i_next,
		Size const	j,
		Size const	j_next
	)

References runtime_assert.

protocols::farna::BasePairStep::~BasePairStep

(

)

Member Function Documentation

Size const& protocols::farna::BasePairStep::i ( ) const

inline

References base_pair_step_.

Referenced by protocols::farna::BasePairStepSequence::BasePairStepSequence(), protocols::farna::RNA_ChunkLibrary::setup_base_pair_step_chunks(), and protocols::farna::RNA_StructureParameters::setup_jumps().

Size const& protocols::farna::BasePairStep::i_next ( ) const

inline

References base_pair_step_.

Referenced by protocols::farna::BasePairStepSequence::BasePairStepSequence(), protocols::farna::RNA_ChunkLibrary::setup_base_pair_step_chunks(), and protocols::farna::RNA_StructureParameters::setup_jumps().

Size const& protocols::farna::BasePairStep::j ( ) const

inline

References base_pair_step_.

Referenced by protocols::farna::BasePairStepSequence::BasePairStepSequence(), protocols::farna::RNA_ChunkLibrary::setup_base_pair_step_chunks(), and protocols::farna::RNA_StructureParameters::setup_jumps().

Size const& protocols::farna::BasePairStep::j_next ( ) const

inline

References base_pair_step_.

Referenced by protocols::farna::BasePairStepSequence::BasePairStepSequence(), protocols::farna::RNA_ChunkLibrary::setup_base_pair_step_chunks(), and protocols::farna::RNA_StructureParameters::setup_jumps().

Friends And Related Function Documentation

std::ostream& operator<< ( std::ostream &  os, BasePairStep const &  bps  )

friend

Member Data Documentation

std::pair< DinucleotideStrand, DinucleotideStrand > protocols::farna::BasePairStep::base_pair_step_

private

Referenced by i(), i_next(), j(), and j_next().

---

The documentation for this class was generated from the following files:

• symlinks/rosetta/src/protocols/farna/BasePairStep.hh
• symlinks/rosetta/src/protocols/farna/BasePairStep.cc