#include <ResidueCountFilter.hh>

Public Member Functions
	ResidueCountFilter ()

	ResidueCountFilter (ResidueCountFilter const &src)

virtual	~ResidueCountFilter ()

bool	apply (core::pose::Pose const &pose) const
	Returns true if the given pose passes the filter, false otherwise. More...

filters::FilterOP	clone () const

filters::FilterOP	fresh_instance () const

void	report (std::ostream &out, core::pose::Pose const &pose) const

core::Real	report_sm (core::pose::Pose const &pose) const
	used to report filter internals through a score or silent file More...

core::Real	compute (core::pose::Pose const &pose) const

void	parse_my_tag (utility::tag::TagCOP tag, basic::datacache::DataMap &, filters::Filters_map const &, moves::Movers_map const &, core::pose::Pose const &)

core::Size	max_residue_count () const

void	max_residue_count (core::Size value)

bool	enable_max_residue_count () const

void	enable_max_residue_count (bool value)

core::Size	min_residue_count () const

void	min_residue_count (core::Size value)

utility::vector1< std::string >	res_types () const

void	res_types (utility::vector1< std::string > const &res_type)

bool	enable_min_residue_count () const

void	enable_min_residue_count (bool value)

bool	add_residue_type_by_name (core::chemical::ResidueTypeSet const &res_type_set, std::string const &res_type_input)
	Checks whether a residue type is present in the provided residue type set, and if so, adds it to res_types_. More...

Public Member Functions inherited from protocols::filters::Filter
	Filter ()

	Filter (std::string const &)

	Filter (Filter const &)

virtual	~Filter ()

virtual std::string	get_type () const

std::string	get_user_defined_name () const

void	set_user_defined_name (std::string const &name)

virtual void	clear ()
	used to clear internal variables if needed. Using fresh_instance is preferred since it's a pure virtual More...

virtual void	apply (core::io::serialization::PipeMap &pmap)

virtual void	score (core::io::serialization::PipeMap &pmap)

virtual core::Real	score (core::pose::Pose &pose)

virtual void	parse_def (utility::lua::LuaObject const &def, utility::lua::LuaObject const &score_fxns, utility::lua::LuaObject const &tasks)

virtual std::string	name () const

Private Attributes
core::Size	max_residue_count_

bool	enable_max_residue_count_

core::Size	min_residue_count_

bool	enable_min_residue_count_

utility::vector1< std::string >	res_types_

Additional Inherited Members
Protected Attributes inherited from protocols::filters::Filter
std::string	scorename_

Constructor & Destructor Documentation

protocols::simple_filters::ResidueCountFilter::ResidueCountFilter ( )

References filters.

Referenced by clone(), and fresh_instance().

protocols::simple_filters::ResidueCountFilter::ResidueCountFilter ( ResidueCountFilter const & src )

References filters.

protocols::simple_filters::ResidueCountFilter::~ResidueCountFilter ( )

virtual

Member Function Documentation

bool protocols::simple_filters::ResidueCountFilter::add_residue_type_by_name	(	core::chemical::ResidueTypeSet const &	res_type_set,
		std::string const &	res_type_input
	)

Checks whether a residue type is present in the provided residue type set, and if so, adds it to res_types_.

Checks whether a residue type is present in the provided residue type set, and if so, adds it to res_types_ given user specified residue type string, look for residue type name and add it to the list of types to count if it is present in the specified ResidueTypeSet. res_type_set, the residue type set of the input structure res_type_input, the user specified residue type name.

Returns: false if res_type_input doesn't match any residue type names, true otherwise

References core::chemical::ResidueTypeSet::has_name(), and res_types_.

Referenced by parse_my_tag().

bool protocols::simple_filters::ResidueCountFilter::apply ( core::pose::Pose const & pose ) const

virtual

Returns true if the given pose passes the filter, false otherwise.

Implements protocols::filters::Filter.

References compute(), enable_max_residue_count(), enable_min_residue_count(), max_residue_count(), and min_residue_count().

filters::FilterOP protocols::simple_filters::ResidueCountFilter::clone ( ) const

virtual

Implements protocols::filters::Filter.

References ResidueCountFilter().

core::Real protocols::simple_filters::ResidueCountFilter::compute ( core::pose::Pose const & pose ) const

References j, core::conformation::Residue::name(), core::conformation::Residue::name3(), res_types_, core::pose::Pose::residue(), and core::pose::Pose::total_residue().

Referenced by apply(), report(), and report_sm().

bool protocols::simple_filters::ResidueCountFilter::enable_max_residue_count ( ) const

References enable_max_residue_count_.

Referenced by apply(), and parse_my_tag().

void protocols::simple_filters::ResidueCountFilter::enable_max_residue_count ( bool value )

References enable_max_residue_count_.

bool protocols::simple_filters::ResidueCountFilter::enable_min_residue_count ( ) const

References enable_min_residue_count_.

Referenced by apply(), and parse_my_tag().

void protocols::simple_filters::ResidueCountFilter::enable_min_residue_count ( bool value )

References enable_min_residue_count_.

filters::FilterOP protocols::simple_filters::ResidueCountFilter::fresh_instance ( ) const

virtual

Implements protocols::filters::Filter.

References ResidueCountFilter().

core::Size protocols::simple_filters::ResidueCountFilter::max_residue_count ( ) const

References max_residue_count_.

Referenced by apply(), and parse_my_tag().

void protocols::simple_filters::ResidueCountFilter::max_residue_count ( core::Size value )

References max_residue_count_.

core::Size protocols::simple_filters::ResidueCountFilter::min_residue_count ( ) const

References min_residue_count_.

Referenced by apply(), and parse_my_tag().

void protocols::simple_filters::ResidueCountFilter::min_residue_count ( core::Size value )

References min_residue_count_.

void protocols::simple_filters::ResidueCountFilter::parse_my_tag	(	utility::tag::TagCOP	tag,
		basic::datacache::DataMap &	,
		filters::Filters_map const &	,
		moves::Movers_map const &	,
		core::pose::Pose const &	pose
	)