protocols::rpc::JSON_RPC Class Reference

#include <rpc.hh>

Public Member Functions
	JSON_RPC (std::string const &msg, bool capture_tracer=true, BasicInit *basic_init=NULL)
virtual	~JSON_RPC ()
	JSON_RPC (JSON_RPC const &json_rpc)
JSON_RPC const &	operator= (JSON_RPC const &json_rpc)
virtual void	run ()
long	runtime () const
std::string	tracer () const
const core::pose::Pose &	outputpose () const
core::Real	get_fa_score ()
core::Real	get_irms () const

Private Member Functions
void	unpack (const std::string &msg)
void	output_capture_start ()
void	output_capture_stop ()
void	output_capture_clear ()
void	load_user_flag_file (const std::string &flags_file)
void	load_new_set_of_user_flags (const utility::json_spirit::mObject &json_user_flags)
void	load_new_set_of_virtual_files (const utility::json_spirit::mArray &json_user_files, bool clear_previous=true)

Private Attributes
std::string	msg_
std::string	pdbdata_string_
core::pose::Pose	inputpose_
core::pose::Pose	outputpose_
std::string	xmlscript_
std::string	command_
bool	capture_tracer_
std::stringstream	tracer_output_stream_
long	starttime_
long	endtime_
utility::json_spirit::mObject	parsed_json_
BasicInit *	basic_init_

Constructor & Destructor Documentation

protocols::rpc::JSON_RPC::JSON_RPC	(	std::string const &	msg,
		bool	capture_tracer = true,
		BasicInit *	basic_init = NULL
	)

References msg_, and unpack().

virtual protocols::rpc::JSON_RPC::~JSON_RPC ( )

inlinevirtual

protocols::rpc::JSON_RPC::JSON_RPC

(

JSON_RPC const &

json_rpc

)

Member Function Documentation

core::Real protocols::rpc::JSON_RPC::get_fa_score

(

)

References core::scoring::getScoreFunction(), and outputpose_.

core::Real protocols::rpc::JSON_RPC::get_irms

(

)

const

References inputpose_, core::scoring::is_protein_backbone_including_O(), outputpose_, and core::scoring::rmsd_with_super().

void protocols::rpc::JSON_RPC::load_new_set_of_user_flags ( const utility::json_spirit::mObject &  json_user_flags )

private

References get_string(), has_value(), utility::options::OptionCollection::load(), obj_type, and basic::options::option.

Referenced by unpack().

void protocols::rpc::JSON_RPC::load_new_set_of_virtual_files ( const utility::json_spirit::mArray &  json_user_files, bool  clear_previous = true  )

private

References utility::Inline_File_Provider::add_input_file(), utility::Inline_File_Provider::clear_input_files(), filename(), utility::Inline_File_Provider::get_instance(), get_string(), get_string_or_empty(), has_value(), obj_type, and protocols::rpc::TR.

Referenced by unpack().

void protocols::rpc::JSON_RPC::load_user_flag_file ( const std::string &  flags_file )

private

References utility::options::OptionCollection::load_options_from_stream(), and basic::options::option.

JSON_RPC const & protocols::rpc::JSON_RPC::operator=

(

JSON_RPC const &

json_rpc

)

References capture_tracer_, command_, endtime_, inputpose_, msg_, outputpose_, parsed_json_, pdbdata_string_, starttime_, tracer_output_stream_, and xmlscript_.

void protocols::rpc::JSON_RPC::output_capture_clear ( )

private

References tracer_output_stream_.

void protocols::rpc::JSON_RPC::output_capture_start ( )

private

References basic::set_new_final_channel(), and tracer_output_stream_.

Referenced by run(), and unpack().

void protocols::rpc::JSON_RPC::output_capture_stop ( )

private

References basic::set_default_final_channel().

Referenced by run(), and unpack().

const core::pose::Pose& protocols::rpc::JSON_RPC::outputpose ( ) const

inline

References outputpose_.

void protocols::rpc::JSON_RPC::run ( )

virtual

References utility::Inline_File_Provider::add_input_file(), protocols::moves::Mover::apply(), utility::json_spirit::Error_position::column_, command_, endtime_, protocols::rosetta_scripts::RosettaScriptsParser::generate_mover_from_pose(), utility::Inline_File_Provider::get_instance(), get_int(), get_mArray(), get_real(), get_string(), inputpose_, utility::json_spirit::Error_position::line_, obj_type, output_capture_start(), output_capture_stop(), outputpose_, parsed_json_, pdbdata_string_, core::import_pose::pose_from_pdbstring(), protocol, utility::json_spirit::Error_position::reason_, s, core::pose::Pose::set_alpha(), core::pose::Pose::set_beta(), core::pose::Pose::set_chi(), core::pose::Pose::set_delta(), core::pose::Pose::set_epsilon(), core::pose::Pose::set_gamma(), core::pose::Pose::set_omega(), core::pose::Pose::set_phi(), core::pose::Pose::set_psi(), core::pose::Pose::set_zeta(), starttime_, protocols::rpc::TR, tracer(), and xmlscript_.

long protocols::rpc::JSON_RPC::runtime ( ) const

inline

References endtime_, and starttime_.

std::string protocols::rpc::JSON_RPC::tracer ( ) const

inline

References tracer_output_stream_.

Referenced by run(), and unpack().

void protocols::rpc::JSON_RPC::unpack ( const std::string &  msg )

private

References basic_init_, utility::json_spirit::Error_position::column_, command_, protocols::rpc::BasicInit::do_init(), get_mArray(), get_mObject(), get_string(), get_string_or_empty(), has_value(), utility::json_spirit::Error_position::line_, load_new_set_of_user_flags(), load_new_set_of_virtual_files(), output_capture_start(), output_capture_stop(), parsed_json_, pdbdata_string_, read_mObject(), utility::json_spirit::Error_position::reason_, s, tracer(), and xmlscript_.

Referenced by JSON_RPC().

Member Data Documentation

BasicInit* protocols::rpc::JSON_RPC::basic_init_

private

Referenced by unpack().

bool protocols::rpc::JSON_RPC::capture_tracer_

private

Referenced by operator=().

std::string protocols::rpc::JSON_RPC::command_

private

Referenced by operator=(), run(), and unpack().

long protocols::rpc::JSON_RPC::endtime_

private

Referenced by operator=(), run(), and runtime().

core::pose::Pose protocols::rpc::JSON_RPC::inputpose_

private

Referenced by get_irms(), operator=(), and run().

std::string protocols::rpc::JSON_RPC::msg_

private

Referenced by JSON_RPC(), and operator=().

core::pose::Pose protocols::rpc::JSON_RPC::outputpose_

private

Referenced by get_fa_score(), get_irms(), operator=(), outputpose(), and run().

utility::json_spirit::mObject protocols::rpc::JSON_RPC::parsed_json_

private

Referenced by operator=(), run(), and unpack().

std::string protocols::rpc::JSON_RPC::pdbdata_string_

private

Referenced by operator=(), run(), and unpack().

long protocols::rpc::JSON_RPC::starttime_

private

Referenced by operator=(), run(), and runtime().

std::stringstream protocols::rpc::JSON_RPC::tracer_output_stream_

private

Referenced by operator=(), output_capture_clear(), output_capture_start(), and tracer().

std::string protocols::rpc::JSON_RPC::xmlscript_

private

Referenced by operator=(), run(), and unpack().

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The documentation for this class was generated from the following files:

• symlinks/rosetta/src/protocols/rpc/rpc.hh
• symlinks/rosetta/src/protocols/rpc/rpc.cc